Table 2. List of available tracks in iMETHYL.
| Track name | Description | Source |
|---|---|---|
| IMM_CpG_CD4T | Information for each CpG site of CD4T | Ref. 4 |
| IMM_CpG_CD4T_avg | Average DNAm level of each CpG site of CD4T | Ref. 4 |
| IMM_CpG_CD4T_sd | DNAm variations of each CpG site of CD4T measured by SD | Ref. 4 |
| IMM_CpG_CD4T_RI | DNAm variations of each CpG site of CD4T measured by RI | Ref. 4 |
| IMM_CpG_Mono | Information for each CpG site of monocytes | Ref. 4 |
| IMM_CpG_Mono_avg | Average DNAm level of each CpG site of monocytes | Ref. 4 |
| IMM_CpG_Mono_sd | DNAm variations of each CpG site of monocytes measured by SD | Ref. 4 |
| IMM_CpG_Mono_RI | DNAm variations of each CpG site of monocytes measured by RI | Ref. 4 |
| IMM_CpG_Neu | Information for each CpG site of neutrophils | This study |
| IMM_CpG_Neu_avg | Average DNAm level of each CpG site of neutrophils | This study |
| IMM_CpG_Neu_sd | DNAm variations of each CpG site of neutrophils measured by SD | This study |
| IMM_CpG_Neu_RI | DNAm variations of each CpG site of neutrophils measured by RI | This study |
| IMM_FPKM_CD4T | FPKM values of each transcript of CD4T | Ref. 4 |
| IMM_FPKM_Mono | FPKM values of each transcript of monocytes | Ref. 4 |
| IMM_FPKM_Neu | FPKM values of each transcript of neutrophils | This study |
| IMM_SNV_CD4T | Information for each SNV of CD4T | Ref. 4 |
| IMM_SNV_Mono | Information for each SNV of monocytes | Ref. 4 |
| IMM_SNV_Neu | Information for each SNV of neutrophils | This study |
| Reference sequence | Human genome hg19/GRCh37 sequence | UCSC genome browser |
| RepeatMasker | Repetitive elements | UCSC genome browser |
| CpGIslandsExt | CpG island locations | UCSC genome browser |
| HM450 | Probe information for Illumina Infinium HumanMethylation450 | UCSC genome browser |
| gencode_v19 | Information of genes obtained from GENCODE version 19 | GENCODE |
| gencode_v19_trs | Information of transcripts obtained from GENCODE version 19 | GENCODE |
Abbreviations: CD4T, CD4+ T-lymphocyte; DNAm, DNA methylation; FPKM, fragments per kilobase of exon per million fragments mapped; RI, reference interval; SD, standard deviation; SNV, single-nucleotide variant.