TABLE 2 .
Mutations detected in suppressor mutants via genome resequencing
| Scaffold IDa | Position | Variant | Type | Locus tag | IMG product nameb |
|---|---|---|---|---|---|
| XoxG suppressor mutants | |||||
| U737DRAFT_scaffold00012 | 20996 | TCC → TAC | Missense variant |
U737DRAFT_03233 | Two-component system, OmpR family, sensor histidine kinase QseC |
| U737DRAFT_scaffold00009 | 145703 | TGG → GGG | Missense variant |
U737DRAFT_02788 | AAA+-type ATPase, SpoVK/Ycf46/Vps4 family |
| U737DRAFT_scaffold00001 | 473441 | GAG → TAG | Stop gained | U737DRAFT_00415 | Outer membrane receptor proteins, mostly Fe transport |
| U737DRAFT_scaffold00007 | 102811 | TAT → TAA | Stop gained | U737DRAFT_02300 | Flagellum-specific ATP synthase |
| XoxF suppressor mutants with the rough biofilm phenotype |
|||||
| U737DRAFT_scaffold00015 | 31983 | GAT → AAT | Missense variant |
U737DRAFT_03712 | Riboflavin synthase alpha chain |
| U737DRAFT_scaffold00024 | 42129 | CAT → CAA | Missense variant |
U737DRAFT_04473 | Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase/long-chain-fatty-acid– [acyl-carrier-protein] ligase |
| U737DRAFT_scaffold00019 | 1330 | C → CATGCA CCAAAT |
Indel | U737DRAFT_04087 | Transmembrane exosortase (Exosortase_EpsH) |
| U737DRAFT_scaffold00030 | 95 | C → CGTTAGCG GATTTGGCTGGTT |
Indel (intergenic region) |
U737DRAFT_04704 | Exosortase A |
a
Scaffold ID, scaffold identification number.
b
IMG, Integrated Microbial Genomes Database (https://img.jgi.doe.gov).