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. 2018 Mar 22;9:428. doi: 10.3389/fimmu.2018.00428

Table 2.

Characteristics of peptide fragments of CXCR3.

# Sequence1 Length Residues2 MW3 Hydrophobicity4 pI5 Charge6
1 MVLEVSDHQVLNDAEVAALL 20 1–20 2392.3 0.72 3.74 −3.92
2 LNDAEVAALLENFSSSYDYG 20 11–30 2441.0 −0.13 3.30 −4.09
3 ENFSSSYDYGENESDSCCTS 20 21–40 2486.8 −1.26 3.23 −5.18
4 ENESDSCCTSPPCPQDFSLN 20 31–50 2435.7 −0.96 3.30 −4.23
5 PPCPQDFSLNFDRAFLPALY 20 41–60 2536.5 −0.06 4.11 −1.14
6 FDRAFLPALYSLLFLLGLLG 20 51–70 2464.9 1.50 6.33 −0.09
7 SLLFLLGLLGNGAVAAVLLS 20 61–80 2188.8 2.04 6.10 −0.09
8 NGAVAAVLLSRRTALSSTDT 20 71–90 2228.4 0.31 10.40 0.91
9 RRTALSSTDTFLLHLAVADT 20 81–100 2413.6 0.20 7.55 0.08
10 FLLHLAVADTLLVLTLPLWA 20 91–110 2446.1 1.82 5.29 −0.92
11 LLVLTLPLWAVDAAVQWVFG 20 101–120 2476.0 1.63 3.75 −1.09
12 VDAAVQWVFGSGLCKVAGAL 20 111–130 2215.7 1.16 6.16 −0.14
13 SGLCKVAGALFNINFYAGAL 20 121–140 2255.0 1.06 8.52 0.86
14 FNINFYAGALLLACISFDRY 20 131–150 2538.0 0.90 6.16 −0.14
15 LLACISFDRYLNIVHATQLY 20 141–160 2579.6 0.75 7.35 0.03
16 LNIVHATQLYRRGPPARVTL 20 151–170 2500.9 −0.11 12.20 3.07
17 RRGPPARVTLTCLAVWGLCL 20 161–180 2408.2 0.62 10.52 2.81
18 TCLAVWGLCLLFALPDFIFL 20 171–190 2501.5 2.07 3.75 −1.18
19 LFALPDFIFLSAHHDERLNA 20 181–200 2551.7 0.31 5.36 −1.75
20 SAHHDERLNATHCQYNFPQV 20 191–210 2592.7 −1.13 6.78 −0.64
21 THCQYNFPQVGRTALRVLQL 20 201–220 2571.2 −0.20 9.50 2.03
22 GRTALRVLQLVAGFLLPLLV 20 211–230 2375.3 1.50 12.50 1.91
23 VAGFLLPLLVMAYCYAHILA 20 221–240 2404.6 1.93 7.35 0.02
24 MAYCYAHILAVLLVSRGQRR 20 231–250 2546.0 0.51 10.13 3.02
25 VLLVSRGQRRLRAMRLVVVV 20 241–260 2545.8 0.85 13.10 4.91
26 LRAMRLVVVVVVAFALCWTP 20 251–270 2471.0 1.85 10.53 1.86
27 VVAFALCWTPYHLVVLVDIL 20 261–280 2497.5 1.92 5.29 −0.97
28 YHLVVLVDILMDLGALARNC 20 271–290 2454.4 1.21 5.41 −0.97
29 MDLGALARNCGRESRVDVAK 20 281–300 2388.1 −0.36 8.55 0.86
30 GRESRVDVAKSVTSGLGYMH 20 291–310 2374.9 −0.43 9.30 1.08
31 SVTSGLGYMHCCLNPLLYAF 20 301–320 2415.2 0.85 7.25 −0.02
32 CCLNPLLYAFVGVKFRERMW 20 311–330 2672.8 0.50 8.80 1.81
33 VGVKFRERMWMLLLRLGCPN 20 321–340 2644.2 0.25 11.38 2.86
34 MLLLRLGCPNQRGLQRQPSS 20 331–350 2492.9 −0.49 12.20 2.86
35 QRGLQRQPSSSRRDSSWSET 20 341–360 2574.1 −2.01 12.02 1.91
36 SRRDSSWSETSEASYSGL 18 351–368 2229.0 −1.27 4.43 −1.09

Sequence of peptides in one letter format. Each peptide listed is biotinylated at the N-terminus.

Residues are numbered according to Uniprot entry P49682 (CXCR3_HUMAN) isoform 1.

Molecular weight as determined by mass spectrometric quality report of manufacturer.

Hydrophobicity scores were calculated with the function hydrophobicity of R package peptides by the method of Kyte and Doolittle (21).

pI (isoelectric point) values were calculated with the function pI of R package peptides with the default EMBOSS method.

The peptide sum charge was calculated a pH 7.2 with the function charge of R packages peptides, with the method Stryer.