Table 1.
Kyoto Encyclopedia of Genes and Genomes (KEGG) Pathway Enrichment Analysis of differentially expressed proteins (DEPs) (p < 0.05).
| Pathway | DEPs (2868) a | All Proteins (6476) b | Pathway ID | p-Value c |
|---|---|---|---|---|
| Metabolic pathways | 873 (30.44%) | 1845 (28.49%) | ko01100 | 0.001077 |
| Biosynthesis of secondary metabolites | 505 (17.61%) | 1067 (16.48%) | ko01110 | 0.01567 |
| Starch and sucrose metabolism | 108 (3.77%) | 216 (3.34%) | ko00500 | 0.049829 |
| Ribosome | 135 (4.71%) | 237 (3.66%) | ko03010 | 0.0000442 |
| Phenylpropanoid biosynthesis | 91 (3.17%) | 140 (2.16%) | ko00940 | 0.000000492 |
| Pentose and glucuronate interconversions | 77 (2.68%) | 142 (2.19%) | ko00040 | 0.010236 |
| Peroxisome | 68 (2.37%) | 121 (1.87%) | ko04146 | 0.005217 |
| Carbon fixation in photosynthetic organisms | 56 (1.95%) | 104 (1.61%) | ko00710 | 0.030497 |
| Glycine, serine and threonine metabolism | 51 (1.78%) | 87 (1.34%) | ko00260 | 0.00477 |
| Glutathione metabolism | 50 (1.74%) | 85 (1.31%) | ko00480 | 0.004702 |
| Glyoxylate and dicarboxylate metabolism | 40 (1.39%) | 68 (1.05%) | ko00630 | 0.010849 |
| Cyanoamino acid metabolism | 40 (1.39%) | 70 (1.08%) | ko00460 | 0.020206 |
| beta-Alanine metabolism | 34 (1.19%) | 52 (0.8%) | ko00410 | 0.001692 |
| Phenylalanine metabolism | 34 (1.19%) | 53 (0.82%) | ko00360 | 0.00273 |
| Flavonoid biosynthesis | 34 (1.19%) | 54 (0.83%) | ko00941 | 0.004267 |
| Other glycan degradation | 34 (1.19%) | 57 (0.88%) | ko00511 | 0.013751 |
| Fatty acid degradation | 30 (1.05%) | 53 (0.82%) | ko00071 | 0.047544 |
| alpha-Linolenic acid metabolism | 29 (1.01%) | 49 (0.76%) | ko00592 | 0.025178 |
| Terpenoid backbone biosynthesis | 29 (1.01%) | 50 (0.77%) | ko00900 | 0.035041 |
| Photosynthesis | 27 (0.94%) | 42 (0.65%) | ko00195 | 0.00701 |
| Ubiquinone and other terpenoid-quinone biosynthesis | 25 (0.87%) | 39 (0.6%) | ko00130 | 0.009848 |
| Sphingolipid metabolism | 25 (0.87%) | 42 (0.65%) | ko00600 | 0.033381 |
| Tropane, piperidine and pyridine alkaloid biosynthesis | 21 (0.73%) | 31 (0.48%) | ko00960 | 0.007088 |
| Stilbenoid, diarylheptanoid and gingerol biosynthesis | 20 (0.7%) | 29 (0.45%) | ko00945 | 0.006307 |
| Limonene and pinene degradation | 17 (0.59%) | 20 (0.31%) | ko00903 | 0.000214 |
| Lysine degradation | 17 (0.59%) | 26 (0.4%) | ko00310 | 0.024492 |
| Photosynthesis—antenna proteins | 7 (0.24%) | 8 (0.12%) | ko00196 | 0.016319 |
| Phenylpropanoid biosynthesis | 91 (3.17%) | 140 (2.16%) | ko00940 | 0.000000492 |
a Differentially expressed proteins (DEPs) were analyzed with pathway annotation; b All proteins were analyzed with pathway annotation; c Pathways with p-value higher than 0.05 were not listed.