Table 3.
The codon-anticodon recognition pattern and codon usage for S. uncinata plastome.
| Amino Acid | Codon | No. * | tRNA | Amino Acid | Codon | No. * | tRNA |
|---|---|---|---|---|---|---|---|
| Phe | UUU | 2862 | Tyr | UAU | 1492 | ||
| Phe | UUC | 916 | trnF-GAA | Tyr | UAC | 578 | trnY-GUA |
| Leu | UUG | 688 | trnL-UAA | Stop | UAA | 1772 | |
| Leu | UUA | 1766 | trnL-CAA | Stop | UAG | 577 | |
| Leu | CUG | 252 | His | CAU | 550 | ||
| Leu | CUA | 591 | trnL-UAG | His | CAC | 224 | trnH-GUG |
| Leu | CUU | 741 | Gln | CAA | 685 | trnQ-UUG | |
| Leu | CUC | 305 | Gln | CAG | 273 | ||
| Ile | AUG | 1582 | trnI-CAU | Asn | AAU | 1878 | |
| Ile | AUU | 1943 | Asn | AAC | 665 | trnN-GUU | |
| Ile | AUC | 629 | trnI-GAU | Lys | AAA | 2942 | trnK-UUU |
| Met | AUG | 515 | trnfM-CAU | Lys | AAG | 768 | |
| Val | GUG | 244 | Asp | GAU | 619 | ||
| Val | GUA | 588 | trnV-UAC | Asp | GAC | 210 | trnD-GUC |
| Val | GUU | 652 | Glu | GAA | 845 | trnE-UUC | |
| Val | GUC | 237 | trnV-GAC | Glu | GAG | 286 | |
| Ser | AGU | 579 | Cys | UGU | 515 | ||
| Ser | AGC | 470 | trnS-GCU | Cys | UGC | 362 | trnC-GCA |
| Ser | UCG | 272 | Stop | UGA | 657 | ||
| Ser | UCA | 643 | trnS-UGA | Trp | UGG | 455 | trnW-CCA |
| Pro | CCG | 169 | Arg | AGG | 387 | ||
| Pro | CCA | 429 | trnP-UGG | Arg | AGA | 732 | trnR-UCU |
| Pro | CCU | 423 | Arg | CGG | 164 | trnR-CCG | |
| Pro | CCC | 230 | trnP-GGG | Arg | CGA | 322 | |
| Thr | ACG | 228 | Arg | CGU | 270 | trnR-ACG | |
| Thr | ACA | 508 | trnT-UGU | Arg | CGC | 143 | |
| Thr | ACU | 561 | Ser | UCU | 735 | ||
| Thr | ACC | 363 | trnT-GGU | Ser | UCC | 419 | trnS-GGA |
| Ala | GCG | 155 | Gly | GGG | 426 | ||
| Ala | GCA | 367 | trnA-UGC | Gly | GGA | 465 | trnG-UCC |
| Ala | GCU | 413 | Gly | GGU | 653 | ||
| Ala | GCC | 514 | Gly | GGC | 237 |
* Numerals indicate the frequency of usage of each codon in 40,330 in codons in 82 potential protein-coding genes.