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. 2018 Mar 14;19(3):850. doi: 10.3390/ijms19030850
T-RFLP terminal restriction fragment length polymorphism
PLFA phospholipid fatty acid
OTU operational taxonomic unit
NPR rhizosphere soil from the newly planted plants
MUR rhizosphere soil from monocultured uninfected plants
MIR rhizosphere soil from monocultured infected plants
NPP rhizoplane soil from the newly planted plants
MUP rhizoplane soil from monocultured uninfected plants
MIP rhizoplane soil from monocultured infected plants
PCoA principal coordinate analysis
UPGMA unweighted pair-group method with arithmetic means
WUF weighted UniFrac metric
UUF unweighted UniFrac metric
NMDS non-metric multidimensional scaling
ANOVA one-way analysis of variance
ANOSIM analysis of similarity
LDA linear discriminant analysis
LEfSe linear discriminant analysis effect size
PDA potato-dextrose agar