Figure 3.

(A) Percentage of correctly predicted non-template residues, and (B) difference between the percentages of correctly predicted non-template residues and incorrectly predicted template residues. The data are provided for targets with at least 15 residues missing in the best template. A residue is considered as correctly aligned/predicted in the template/model if its Cα error is less than 3.8Å in the optimal LGA superposition. Values greater than zero in panel (B) indicate net gain in the modeling (i.e., more correctly predicted residues from those missing in the template than incorrectly predicted residues from those available in the template). The best model for target T0868 (the highest positive outlier marked in panel B) includes substantial portion of the structure that was not available from the best templates and was modeled ab initio.