Table 1.

Results of the Wilcoxon signed rank tests on combined z-scores according to five evaluation measures (see Materials for the formula) for (A) all groups on ‘human’ targets and (B) server-only groups on all released targets. The upper right part of the table shows the numbers of common domains predicted. The lower part displays the probabilities that the differences between two combined z-scores are due to chance (values below 0.05 are marked as ‘<’ for compactness). Shaded cells highlight pairs of statistically indistinguishable groups at the 0.05 significance level. Server methods are in italics.

(A)
		1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20
McGuffin	1	-	29	29	29	29	29	28	29	29	29	29	29	27	28	29	29	27	29	29	29
VoroMQA-select	2	0.8	-	29	29	29	29	28	29	29	29	29	29	27	28	29	29	27	29	29	29
Zhang	3	1.0	0.4	-	29	29	29	28	29	29	29	29	29	27	28	29	29	27	29	29	29
ProQ2	4	0.9	0.5	0.3	-	29	29	28	29	29	29	29	29	27	28	29	29	27	29	29	29
Wallner	5	0.1	0.2	<	0.3	-	29	28	29	29	29	29	29	27	28	29	29	27	29	29	29
MULTICOM	6	0.2	<	<	0.2	0.9	-	28	29	29	29	29	29	27	28	29	29	27	29	29	29
wfRos-ProQ-ModF6	7	0.2	0.3	0.5	0.6	0.8	0.8	-	28	28	28	28	28	26	28	28	28	26	28	28	28
Seok-refine	8	0.2	0.1	0.1	0.1	0.4	0.9	0.7	-	29	29	29	29	27	28	29	29	27	29	29	29
Zhang-Server	9	0.1	<	<	0.6	1.0	0.8	0.5	0.5	-	29	29	29	27	28	29	29	27	29	29	29
LEEab	10	<	<	<	<	<	<	<	<	<	-	29	29	27	28	29	29	27	29	29	29
LEE	11	<	<	<	<	<	<	<	<	<	0.5	-	29	27	28	29	29	27	29	29	29
QUARK	12	<	<	<	0.2	0.2	0.7	0.2	0.7	<	<	<	-	27	28	29	29	27	29	29	29
wfAll-Cheng	13	<	<	<	0.2	0.1	0.1	0.2	0.5	0.2	<	<	0.9	-	26	27	27	25	27	27	27
raghavagps	14	<	<	<	0.1	<	<	0.1	0.4	<	0.1	0.1	0.2	0.5	-	28	28	26	28	28	28
BAKER	15	<	<	<	<	<	<	<	<	<	<	<	<	<	<	-	29	27	29	29	29
Jones-UCL	16	<	<	<	<	<	<	0.1	0.1	<	0.5	0.3	0.1	0.2	0.6	<	-	27	29	29	29
Chicken_George	17	<	<	<	<	<	<	0.1	<	<	1.0	0.8	<	<	<	<	0.4	-	27	27	27
MUFOLD	18	<	<	<	<	<	<	<	<	<	<	<	<	<	<	0.4	<	0.1	-	29	29
wfMESHI-Seok	19	<	<	<	<	<	<	<	<	<	0.7	1.0	<	<	0.1	<	0.2	0.9	<	-	29
Pcomb-domain	20	<	<	<	<	<	<	<	<	<	<	<	<	<	<	<	<	<	<	<	-

(B)
		1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20
Zhang-Server	1	-	57	57	57	57	57	57	57	57	57	57	57	57	57	53	56	57	57	57	57
QUARK	2	0.1	-	57	57	57	57	57	57	57	57	57	57	57	57	53	56	57	57	57	57
BAKER-Rosettaserv	3	<	<	-	57	57	57	57	57	57	57	57	57	57	57	53	56	57	57	57	57
Seok-server	4	<	<	<	-	57	57	57	57	57	57	57	57	57	57	53	56	57	57	57	57
IntFOLD4	5	<	<	<	0.5	-	57	57	57	57	57	57	57	57	57	53	56	57	57	57	57
GOAL	6	<	<	1.0	<	<	-	57	57	57	57	57	57	57	57	53	56	57	57	57	57
MULTICOM-cluster	7	<	<	<	0.1	0.2	<	-	57	57	57	57	57	57	57	53	56	57	57	57	57
MULTICOM-constr	8	<	<	<	0.1	0.3	0.0	0.7	-	57	57	57	57	57	57	53	56	57	57	57	57
MULTICOM-novel	9	<	<	0.3	<	<	0.2	<	<	-	57	57	57	57	57	53	56	57	57	57	57
RaptorX	10	<	<	<	<	<	<	<	<	<	-	57	57	57	57	53	56	57	57	57	57
myprotein-me	11	<	<	<	<	<	<	<	<	<	0.4	-	57	57	57	53	56	57	57	57	57
HHGG	12	<	<	<	<	<	<	<	<	<	0.4	0.3	-	57	57	53	56	57	57	57	57
HHPred0	13	<	<	<	<	<	<	<	<	<	<	0.6	<	-	57	53	56	57	57	57	57
HHPred1	14	<	<	<	<	<	<	<	<	<	<	0.8	<	0.1	-	53	56	57	57	57	57
ACOMPMOD	15	<	<	<	<	<	<	<	<	<	<	<	<	<	<	-	52	53	53	53	53
YASARA	16	<	<	<	<	<	<	<	<	<	0.2	0.1	0.2	<	<	<	-	56	56	56	56
MULTICOM-refine	17	<	<	<	<	<	<	<	<	<	<	<	<	<	<	0.3	<	-	57	57	57
FALCON_TOPO	18	<	<	<	<	<	<	<	<	<	<	<	<	<	<	<	1.0	<	-	57	57
RBO_Aleph	19	<	<	<	<	<	<	<	<	<	<	<	<	<	<	0.5	<	0.4	<	-	57
FALCON_TOPOX	20	<	<	<	<	<	<	<	<	<	<	<	<	<	<	<	0.9	<	0.7	<	-