Table 2.

Results of the head-to-head comparisons of the bottom 20 groups on commonly predicted targets: (A) all groups on ‘human’ targets and (B) server-only groups on all targets. The table shows the percentage of targets Pij where the combined z-score of the group listed in the row i was higher than z-score of the group listed in the column j. Values Pij and Pji may not sum up to 100% as ties are omitted. Shaded cells highlight pairs of groups for which difference between the percentages of wins and losses is comparable (less than 25%). Server groups are in italics.

(A)
		1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20
McGuffin	1	-	45	48	48	62	59	54	59	66	90	90	69	74	75	100	62	78	93	90	100
VoroMQA-select	2	55	-	55	62	69	79	57	62	69	93	97	66	78	82	93	72	81	97	90	97
Zhang	3	52	45	-	55	69	72	50	69	69	93	97	72	70	75	97	66	89	93	86	97
ProQ2	4	52	38	45	-	69	62	57	66	55	83	83	59	70	68	93	72	70	93	90	93
Wallner	5	38	31	31	31	-	45	46	52	48	93	93	55	67	68	93	62	67	93	86	100
MULTICOM	6	41	21	28	38	55	-	50	45	41	83	83	45	67	68	93	55	63	93	83	100
wfRos-ProQ-ModF6	7	43	43	50	43	54	50	-	57	61	75	82	71	62	68	82	64	69	82	82	86
Seok-refine	8	41	38	31	34	48	55	43	-	52	76	76	48	59	61	90	59	70	86	83	90
Zhang-Server	9	34	31	31	45	52	59	39	48	-	90	93	66	56	50	90	59	70	97	79	97
LEEab	10	10	7	7	17	7	17	25	24	10	-	55	21	15	36	83	45	48	86	55	97
LEE	11	10	3	3	17	7	17	18	24	7	45	-	10	15	36	76	34	52	83	52	90
QUARK	12	31	34	28	41	45	55	29	52	34	79	90	-	48	46	86	52	48	93	76	93
wfAll-Cheng	13	26	22	30	30	33	33	38	41	44	85	85	52	-	58	93	59	68	93	78	93
raghavagps	14	25	18	25	32	32	32	32	39	21	64	64	43	42	-	82	54	69	79	61	89
BAKER	15	0	7	3	7	7	7	18	10	10	17	24	14	7	18	-	31	33	41	14	62
Jones-UCL	16	38	28	34	28	38	45	36	41	41	55	66	48	41	46	69	-	59	76	66	90
Chicken_George	17	22	19	11	30	33	37	31	30	11	52	48	30	32	12	63	41	-	63	48	74
MUFOLD	18	7	3	7	7	7	7	18	14	3	14	17	7	7	21	59	24	37	-	24	79
wfMESHI-Seok	19	10	10	14	10	14	17	18	17	21	45	48	24	22	39	86	34	52	76	-	86
Pcomb-domain	20	0	3	3	7	0	0	14	10	3	3	10	7	7	11	38	10	26	21	14	-

(B)
		1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20
Zhang-Server	1	-	60	89	61	70	93	70	72	84	100	91	98	93	96	100	80	100	98	96	98
QUARK	2	40	-	88	56	67	84	68	72	86	95	93	96	95	93	100	79	100	100	98	98
BAKER-Rosettaserv	3	11	12	-	35	28	53	40	39	46	81	60	74	65	65	94	64	93	86	75	84
Seok-server	4	39	44	65	-	61	72	67	63	74	82	81	86	81	84	92	77	91	88	88	88
IntFOLD4	5	30	33	72	39	-	72	56	56	72	93	82	96	95	91	96	75	96	96	86	95
GOAL	6	7	16	47	28	28	-	30	33	40	93	67	91	72	79	100	63	96	100	81	100
MULTICOM-cluster	7	30	32	60	33	44	70	-	49	74	86	81	86	81	82	100	75	100	91	86	91
MULTICOM-constr	8	28	28	61	37	44	67	51	-	77	88	79	88	79	81	98	77	96	93	88	93
MULTICOM-novel	9	16	14	54	26	28	60	26	23	-	86	70	86	72	74	94	70	96	93	86	95
RaptorX	10	0	5	19	18	7	7	14	12	14	-	42	53	37	35	96	54	95	72	74	72
myprotein-me	11	9	7	40	19	18	33	19	21	30	58	-	61	53	53	87	54	75	67	72	65
HHGG	12	2	4	26	14	4	9	14	12	14	47	39	-	26	23	94	52	89	68	74	75
HHPred0	13	7	5	35	19	5	28	19	21	28	63	47	74	-	56	96	48	91	82	77	82
HHPred1	14	4	7	35	16	9	21	18	19	26	65	47	77	44	-	96	48	91	77	77	81
ACOMPMOD	15	0	0	6	8	4	0	0	2	6	4	13	6	4	4	-	33	51	4	43	4
YASARA	16	20	21	36	23	25	38	25	23	30	46	46	48	52	52	67	-	68	46	61	48
MULTICOM-refine	17	0	0	7	9	4	4	0	4	4	5	25	11	9	9	49	32	-	18	44	12
FALCON_TOPO	18	2	0	14	12	4	0	9	7	7	28	33	32	18	23	96	54	82	-	70	51
RBO_Aleph	19	4	2	25	12	14	19	14	12	14	26	28	26	23	23	57	39	56	30	-	30
FALCON_TOPOX	20	2	2	16	12	5	0	9	7	5	28	35	25	18	19	96	52	88	46	70	-