Table I. O-glycans released from tryptic peptides of S. sputigena C9LY14 flagellin using reductive β-elimination. Released O-glycans were detected using PGC nanoLC-ESI MSMS. RT, retention time in minutes; all mass values are in Dalton; calc. m/z, theoretical m/z value. Structures of O-glycans in bold letters were determined based on MSMS spectra in negative ion mode. For all others, no product ion spectrum was generated, assignment based on MS1 level only.
RT | m/z | z | calc. m/z | Δm/z | Composition | Modification | Relative abundance [%] |
---|---|---|---|---|---|---|---|
24.7 | 457.16 | 1 | 457.19 | -0.03 | Rha3 | 7.6 | |
28.3 | 749.34 | 1 | 749.31 | 0.03 | Rha5 | 59.0 | |
39.9 | 763.34 | 1 | 763.32 | 0.02 | Rha5 | +14 Da | 0.9 |
38.6 | 791.36 | 1 | 791.32 | 0.04 | Rha5 | +42 Da | 0.5 |
24.5 | 660.30 | 1 | 660.27 | 0.03 | Rha3 GlcNAc | 3.8 | |
26.1 | 660.30 | 1 | 660.27 | 0.03 | Rha3 GlcNAc | 8.4 | |
29.5 | 660.30 | 1 | 660.27 | 0.03 | Rha3 GlcNAc | 19.3 | |
37.9 | 702.31 | 1 | 702.28 | 0.03 | Rha3 GlcNAc | +42 Da | 0.5 |