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. 2018 Jan 22;17(4):655–671. doi: 10.1074/mcp.RA117.000519

Table I. Signaling pathways enriched in proteins uniquely altered by combined birinapant/paclitaxel exposure.

Term Gene Name p value (-log10) Altered proteins #
Mitochondrial Function and Metabolism
    Mitochondrial dysfunction AIFM1, APP, ATP5A1, ATP5B, ATP5H, ATP5O, COX7A2, COX7A2L, CYB5A, FIS1, NDUFA11, NDUFB4, NDUFB6, PRDX3, SOD2, TXN2, TXNRD2, UQCRC1, UQCRFS1, VDAC1, VDAC2, VDAC3 6.57 37
    Oxidative phosphorylation ATP5H, ATP5O, ATP5A1, ATP5B, ATP6VOD1, ATP6V0A1, NDUFA11, NDUFB6, TCIRG1, COX7A2, COX7A2L, AIFM1, NSDHL, PMVK, EBP, IDI1, MVK, UQCRC1, UQCRFS1, NDUFB4 3.28
    Citrate cycle (TCA cycle) MDH2, PCK2 1.43
    Glycolysis/gluconeogenesis GALM, HK1, LDHB, PCK2, PGM2 1.38
    Pyruvate metabolism LDHB, MDH2, ME2, PCK2 1.19
    Fatty acid metabolism ACADS, ECHS1, ACAA2 2.03
    Fatty acid elongation in mitochondria ECHS1, ACAA2 1.17
    Fatty acid beta-oxidation ACAA2, ECHS1, HSD17B4, SLC27A4, ACADS, HSD17B4 2.21
    Superpathway of cholesterol biosynthesis EBP, IDI1, MVK, NSDHL, PMVK, SQLE 1.85
Cell Growth and Apoptosis
    Apoptosis signaling pathway AIFM1, CHP1, RIPK1, AKT1, AKT2 2.68 29
    MAPK signaling pathway LAMTOR3, CHP1, NFKB2, RRAS2, RPS6KA4, STK4, AKT1, AKT2, CRKL 3.26
    ERBB signaling pathway CAMK2D, ABL2, AKT1, AKT2, CRKL 3.36
    mTOR signaling pathway AKT1, AKT2, FAU, PIK3C2A, RHOG, RPS2, RPS9, RPS13, RPS15, RPS18, RPS23, RPS26, RPS29, RPS6KA4, RPTOR, RRAS2 1.62
    Insulin receptor signaling AKT1, AKT2, CRKL, EIF2B2, PIK3C2A, RPTOR, RRAS2, STX4, SYNJ2 1.26
    PI3K/AKT signaling pathway AKT1, AKT2, CRKL, NFKB2, PIK3C2A 2.02
    JAK/STAT signaling pathway AKT1, AKT2, NFKB2, PIK3C2A, RRAS2 2.11
    Insulin signaling pathway HK1, PCK2, PHKA1, RPTOR, AKT1, AKT2, CRKL 4.71
Cell Cycle
    G2/M DNA damage checkpoint regulation AURKA, PKMYT1, CKS1B, AJUBA, ZC3HC1 1.85 21
    Mitosis F2, DBI, APOE, CKAP2, GRN, AJUBA, KIFC1, ZC3HC1, AURKA, CDCA8, TAF6, ARRB1, AKT1, ERRFI1, UBE2C, NUDCD3, CUL7, AXL, BUB1B, PKMYT1, PPP1R12C 1.43
    Ploidy SQSTM1, CKAP2, AURKA, AKT1, CKSlB, BUB1B 1.32