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. 2018 Apr;4(2):a002246. doi: 10.1101/mcs.a002246

Table 1.

Variant information for ATRX and TP53 germline variants, which were present in both cases

Gene Chromosome HGVS coding DNA reference HGVS protein reference Variant type Predicted effect dbSNP/dbVar ID Genotype ClinVar ID
ATRX Chr X:76856021 NM_000489:exon23: c.5579A>G NM_000489:exon23: p.N1860S (p.Asn1860Ser) Nonsynonymous SNV Asn1860Ser rs45439799 Heterozygous VCV000011724.1
TP53 Chr 17:7577548 NM_000546:exon7:c.733G>A NM_000546:exon7:p.G245S (p.Gly245Ser) Nonsynonymous SNV Gly245Ser rs28934575 Heterozygous VCV000012365.2

HGVS, Human Genome Variation Society; dbSNP, the Single Nucleotide Polymorphism database; dbVar the Database of Genomic Structural Variation.