Table A1.

Mean coverage and mapping quality of whole genome sequence data sets to Af293 reference.

Strain	Mean coverage (X)	Mean mapping quality
V130-15	69	40
V130-14	85	39
V130-18	118	39
V130-54	69	39
V157-39	62	40
V157-40	76	41
V157-47	20	37
V157-48	25	37
V157-62	53	41
V157-59	77	40
V157-60	58	41
V157-61	61	39
V157-80	71	41
Mean across series	65	40