Table 1. Primers used in the study [27].
ASF Number | Forward (5’ > 3’) | Reverse (5’ > 3’)) | Flagellated | |
---|---|---|---|---|
EUB | N.A. | 515F GTGCCAGCMGCCGCGGTAA | 806R GGACTACHVGGGTWTCTAAT | N.A. |
Clostridium sp. | 356 | AAAATAATTAGGAGCTTGCTTTTAA | TTAGAAGATGCCTCCTAAGAACC | Yes |
Lactobacillus intestinalis | 360 | GGTGATGACGCTGGGAAC | AAGCAATAGCCATGCAGC | No |
Lactobacillus murinus | 361 | GAACGAAACTTCTTTATCACC | TAGCATAGCCACCTTTTACA | No |
Mucispirillum shaedleri | 457 | TCTCTTCGGGGATGATTAAAC | AACTTTTCCTATATAAACATGCAC | Yes |
Eubacterium plexicaudatum | 492 | AATTCCTTCGGGGAGGAAGC | TAAAACCATGCGGTTTTAAAAAC | Yes |
Pseudoflavonifractor sp. | 500 | ACGGAGGACCCCTGAAGG | AGCGATAAATCTTTGATGTCC | Yes |
Clostridium sp. | 502 | GAGCGAAGCACTTTTTTAGAAC | TTACACCACCTCAGTTTTTACC | Yes |
Parabacteroides goldsteinii | 519 | GCAGCACGATGTAGCAATACA | TTAACAAATATTTCCATGTGGAAC | No |
Escherichia coli | N.A. | CATGCCGCGTGTATGAAGAA | CGGGTAACGTCAATGAGCAAA | Yes |
36B4 | N.A. | TCCAGGCTTTGGGCATCA | CTTTATTCAGCTGCACATCACTCAGA | N.A. |
CXCL-1 | N.A. | TTGTGCGAAAAGAAGTGCAG | TACAAACACAGCCTCCCACA | N.A. |
IL-6 | N.A. | ACAAGTCGGAGGCTTAATTACACAT | TTGCCATTGCACAACTCTTTTC | N.A. |
Lcn2 | N.A. | AAGGCAGCTTTACGATGTACAGC | CTTGCACATTGTAGCTGTGTACC | N.A. |