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. 2018 Apr 4;13(4):e0195310. doi: 10.1371/journal.pone.0195310

Table 1. Primers used in the study [27].

Flagellated bacteria were determined based on [30]. N.A., not applicable.

ASF Number Forward (5’ > 3’) Reverse (5’ > 3’)) Flagellated
EUB N.A. 515F GTGCCAGCMGCCGCGGTAA 806R GGACTACHVGGGTWTCTAAT N.A.
Clostridium sp. 356 AAAATAATTAGGAGCTTGCTTTTAA TTAGAAGATGCCTCCTAAGAACC Yes
Lactobacillus intestinalis 360 GGTGATGACGCTGGGAAC AAGCAATAGCCATGCAGC No
Lactobacillus murinus 361 GAACGAAACTTCTTTATCACC TAGCATAGCCACCTTTTACA No
Mucispirillum shaedleri 457 TCTCTTCGGGGATGATTAAAC AACTTTTCCTATATAAACATGCAC Yes
Eubacterium plexicaudatum 492 AATTCCTTCGGGGAGGAAGC TAAAACCATGCGGTTTTAAAAAC Yes
Pseudoflavonifractor sp. 500 ACGGAGGACCCCTGAAGG AGCGATAAATCTTTGATGTCC Yes
Clostridium sp. 502 GAGCGAAGCACTTTTTTAGAAC TTACACCACCTCAGTTTTTACC Yes
Parabacteroides goldsteinii 519 GCAGCACGATGTAGCAATACA TTAACAAATATTTCCATGTGGAAC No
Escherichia coli N.A. CATGCCGCGTGTATGAAGAA CGGGTAACGTCAATGAGCAAA Yes
36B4 N.A. TCCAGGCTTTGGGCATCA CTTTATTCAGCTGCACATCACTCAGA N.A.
CXCL-1 N.A. TTGTGCGAAAAGAAGTGCAG TACAAACACAGCCTCCCACA N.A.
IL-6 N.A. ACAAGTCGGAGGCTTAATTACACAT TTGCCATTGCACAACTCTTTTC N.A.
Lcn2 N.A. AAGGCAGCTTTACGATGTACAGC CTTGCACATTGTAGCTGTGTACC N.A.