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. 2018 Feb 28;9(21):15740–15756. doi: 10.18632/oncotarget.24597

Table 2. Analysis of HOTAIR co-expression with HOXA9 in glioma datasets and in other cancer types (lung, leukemia, colorectal, and breast cancer datasets from TCGA) available at Oncomine(1).

Datasets Correlation HOTAIR/HOXA9 p-value
Glioma, NOS
Portuguese dataset 0.642 <0.0001
French dataset 0.516 <0.001
TCGA, microarray data 0.545 <0.0001
TCGA, RNA-seq data 0.675 <0.0001
Oncomine:
  Freije et al. (Freije, et al. 2004) 0.372 <0.001
  Murat (Murat, et al. 2008) 0.293 0.008
  Sun (Sun, et al. 2006) 0.487 <0.0001
  Phillips (Phillips, et al. 2006) 0.309 0.001
Other cancers from Oncomine:
TCGA Lung 0.046 0.555
TCGA Leukemia –0.019 0.791
TCGA Colorectal 0.012 0.854
TCGA Breast –0.051 0.215

(1)Microarray data from Oncomine dataset, microarray or RNA-seq data from TCGA dataset, quantitative PCR data from the Portuguese dataset (relative gene expression normalized to hGUS or TBP levels), and microfluidic-based qPCR analysis (Fluidigm) data from the French dataset were used to evaluate the Pearson’s correlation.

NOS – not otherwise specified.