Table 2.
Genomic intervals associated with sex determination. A chromosomal specific threshold (p-value) identifying the top 0.5% of associated SNP was used to define critical intervals (refer to methods). The size of each is given in Mb, along with the number of significant SNP and Mb position the interval starts and stops.
| CHR | Size (Mb) | Start (Mb) | Stop (MB) | Peak (Mb) | Threshold | SNP |
|---|---|---|---|---|---|---|
| Ssa02 | 33.0 | 17.8 | 50.8 | 50.7 | 197 | 7 |
| Ssa03 | 27.6 | 62.3 | 89.9 | 62.3 | 23 | 9 |
| Ssa05 | 26.4 | 52.7 | 79.1 | 75.9 | 14 | 10 |
| Ssa06 | 18.8 | 51.0 | 69.7 | 66.8 | 86 | 9 |
| Ssa12 | 13.3 | 4.3 | 17.6 | 4.3 | 5 | 7 |
| Ssa24 | 1.6 | 2.5 | 4.2 | 4.2 | 5 | 3 |
| Ssa25 | 0.02 | 17.8 | 17.8 | 17.8 | 5 | 2 |