Table 1.
Summary of RNA-seq reads in control (PeC) and treatment (PeM) groups of Penicillium expansum F-WY-12-02.
| Parameter | PeC | PeM | PeC and PeM |
|---|---|---|---|
| Raw reads | 30694374 | 31424213 | |
| Clean reads | 29133442 | 29730617 | |
| Total mapped | 74.15% | 73.28% | |
| Clean bases | 4.37 G | 4.46 G | |
| Error rate (%) | 0.02 | 0.02 | |
| Q20 (%) | 95.45 | 95.81 | |
| Q30 (%) | 90.04 | 89.71 | |
| GC content (%) | 52.07 | 52.48 | |
| The number of all genes | 11468 | ||
| Genes annotation against GO | 8055 | ||
| DEGs annotation against GO | 1261 | ||
| Genes annotation against KEGG | 4029 | ||
| DEGs annotation against KEGG | 842 | ||
| Up-regulated genes | 920 | ||
| Down-regulated genes | 793 |