Table 4.

Common Association Signals with CIMT and Plaque in both Mexican American and European Americans

Chr.	SNP	Location, bpa	Gene/Nearest Gene	Type	Mexican Americans				European Americans				Combined p valuec
					A1b	MAF	β-SNP (SE)	p-value	A1b	MA F	β-SNP (SE)	p-value
15	chr15:73071294	73071294	RPP25/SCAMP5	IG	A	0.02	−0.5279 (0.1834)	0.004133	A	0.02	−0.7115 (0.2012)	4.54×10−4	2.66×10−5
11	rs582037	125723080	DCPS/ST3GAL4	IG	A	0.40	0.1308 (0.0386)	0.005611	A	0.33	0.234 (0.0648)	3.48×10−4	2.76 × 10−5
3	rs4839634	144619509	SLC9A9	I	G	0.15	0.1592 (0.0633)	0.01215	G	0.14	0.3274 (0.0897)	2.96×10−4	4.87 × 10−5
			Plaque				OR (SE)				OR (SE)
1	rs6694848	63276194	LOC199897/FOXD3	IG	A	0.33	1.516 (0.1309)	0.001473	A	0.46	1.782 (0.1718)	7.69×10−4	1.66×10−5
3	rs9809344	135825448	KY	I	T	0.23	0.7201 (0.1428)	0.02147	T	0.39	0.5426 (0.1676)	2.64×10−4	7.41×10−5
13	rs7327080	22689882	SGCG	I	G	0.33	1.404 (0.1259)	0.007004	G	0.32	0.5607 (0.1774)	0.001111	9.93×10−5

Chr. = chromosome; SNP = single nucleotide polymorphism; MAF = minor allele frequency;

^aBased on National Center for Biotechnology Information (NCBI) Build36 (hg18);

^bA1 = minor allele;

^ccombined p values ranked from low to high;