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. Author manuscript; available in PMC: 2018 Apr 5.
Published in final edited form as: Cell Rep. 2013 Jul 3;4(1):159–173. doi: 10.1016/j.celrep.2013.06.013

Table 1.

Curated gene lists from MSigDB significantly overlapping with the list of SSRP1-enriched genes (only lists with p<0.00E-6 are shown) organized in functional categories. See also Tables S1S4.

Functional category Gene Set Name p-value

MYC-related DANG BOUND BY MYC 0.00E+00
DANG MYC TARGETS UP 0.00E+00
BENPORATH MYC TARGETS WITH EBOX 5.58E-14
BENPORATH MYC MAX TARGETS 1.96E-12
GGGAGGRR V$MAZ Q6 8.47E-09
LEI MYB TARGETS 9.08E-09

Stress-induced ENK UV RESPONSE KERATINOCYTE UP 0.00E+00
DAZARD RESPONSE TO UV NHEK UP 1.11E-16
KRIEG HYPOXIA NOT VIA KNOCKDOWNM3A 1.75E-10
HU GENOTOXIC DAMAGE 24HR 2.56E-09
WINTER HYPOXIA METAGENE 7.04E-09
HARRIS HYPOXIA 1.41E-08
PHONG TNF TARGETS UP 2.05E-08
DAZARD UV RESPONSE CLUSTER G2 2.25E-08

Cancer-related WANG TUMOR INVASIVENESS UP 0.00E+00
GRADE COLON CANCER UP 1.11E-16
OSMAN BLADDER CANCER DN 3.89E-15
CHNG MULTIPLE MYELOMA HYPERPLOID UP 6.55E-15
LI AMPLIFIED IN LUNG CANCER 7.78E-11
ZUCCHI METASTASIS DN 7.31E-10
NUTT GBM VS AO GLIOMA DN 9.06E-10
SWEET LUNG CANCER KRAS UP 2.82E-09
ACEVEDO LIVER CANCER DN 3.51E-09
DIAZ CHRONIC MEYLOGENOUS LEUKEMIA DN 4.35E-08

Meiosis REACTOME MEIOSIS 0.00E+00
REACTOME MEIOTIC RECOMBINATION 0.00E+00
REACTOME MEIOTIC SYNAPSIS 3.15E-14

Ribosome KEGG RIBOSOME 0.00E+00
MIPS RIBOSOME CYTOPLASMIC 0.00E+00
MIPS 60S RIBOSOMAL SUBUNIT CYTOPLASMIC 0.00E+00
MIPS 40S RIBOSOMAL SUBUNIT CYTOPLASMIC 2.22E-16

Stimulated by growth factors NAGASHIMA EGF SIGNALING UP 8.58E-13
AMIT EGF RESPONSE 40 HELA 1.58E-11
NAGASHIMA NRG1 SIGNALING UP 6.56E-11
PEDERSEN METASTASIS BY ERBB2 ISOFORM 1 1.12E-09

Chromatin organization REACTOME DEPOSITION OF NEW CENPA CONTAINING 1.11E-16
NUCLEOSOMES AT THE CENTROMERE 3.33E-12
REACTOME CHROMOSOME MAINTENANCE

Differentiation BENPORATH SOX2 TARGETS 4.74E-09
ESC V6.5 UP EARLY.V1 DN 7.69E-07
ESC J1 UP EARLY.V1 DN 9.86E-06