Table 2. Validation of target genes predicted by TF2Network.
TF symbol | Gene ID | Rank from TF2Network | #Target genes | #Target genes confirmed by ChIP | Percentage recovery |
---|---|---|---|---|---|
PIF4 | AT2G43010 | 1 | 45 | 25 | 55.56% |
FHY3 | AT3G22170 | 1 | 84 | 79 | 94.05% |
EIN3 | AT3G20770 | 1 | 106 | 65 | 61.32% |
PIF3 | AT1G09530 | 5 | 43 | 29 | 67.44% |
PIF5 | AT3G59060 | 13 | 43 | 15 | 34.88% |
AP3 | AT3G54340 | 23 | 102 | 53 | 51.96% |
PI | AT5G20240 | 32 | 103 | 50 | 48.54% |
BES1 | AT1G19350 | 36 | 40 | 10 | 25.00% |