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. 2000 Feb;122(2):517–526. doi: 10.1104/pp.122.2.517

Table I.

Yield of Ser during N-terminal sequencing of a phosphorylated and non-phosphorylated synthetic peptide

Residue No. Amino Acid Yield of Ser
Peak 1 Peak 2 Peak 3
pmol
 6 [24] Arg 5.6 3.8 4.3
 7 [25] Ser 49 (100) 54 (100) 52 (100)
 8 [26] Ser 45 (92) 37 (68) 22 (44)
 9 [27] Val 6.7 9.2 7.8
10 [28] Ser 28 (57) 7.8 (14) 17 (33)
11 [29] Ile 4.6 3.6 8.1
12 [30] Val 2.1 2.5 4.0

A synthetic peptide corresponding to A19 to M39 in BCA1p was phosphorylated with PKC, subjected to reverse-phase HPLC (Fig. 7), and the first 12 residues of peaks 1 to 3 were N-terminally sequenced. The yield of Ser-28 in radio-labeled peak 2 (underlined) was significantly lower than in peak 1 (non-radioactive), indicating that it was phosphorylated. Numbers in brackets correspond to the amino acid position in BCA1p. Numbers in parentheses are the percentage yield of Ser-26 and Ser-28 relative to the yield of Ser-25, which was set to 100%. Values for peak 3 have been multiplied with 1.7 to compensate for the lower amount of peptide subjected to sequencing.