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. 2018 Jan 29;69(7):1499–1516. doi: 10.1093/jxb/erx490

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© The Author(s) 2018. Published by Oxford University Press on behalf of the Society for Experimental Biology.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 4. — Distribution of allele frequency and density of variants specific to the weeping pool. (A) Distribution of allele frequency of 84562 variants. (B) Distribution of density of 18604 variants of allele frequency ranging from 40% to 60%. The colored bar at the bottom represents the assembled reference genome of 17 chromosomes as numbered. Based on z-score test, significant variant density peaks were detected on seven chromosomes, including 5 (z=4.0, P=6.4 × 10⁻⁵), 8 (z=3.4, P=6.7 × 10⁻⁴), 10 (z=4.2, P=2.6 × 10⁻⁵), 12 (z=3.4, P=6.7 × 10⁻⁴), 13 (z=5.1, P=3.4 × 10⁻⁶), 14 (z=7.9, P=0), and 16 (z=3.8, P=1.4 × 10⁻⁴).