Table 1.
Sample | Accession number | Clean reads | Mapping ratio % | Uniquely mapping ratio % | |
---|---|---|---|---|---|
RNA-seq data | 60d_1 | SRR5043824 | 33,532,956 | 83.7 | 73.3 |
60d_2 | SRR5043825 | 39,230,000 | 83.7 | 73.5 | |
60d_3 | SRR5043826 | 36,445,032 | 83.4 | 73.8 | |
120_1 | SRR5043827 | 34,665,986 | 83.6 | 74.1 | |
120_2 | SRR5043828 | 34,780,852 | 81.5 | 71.9 | |
120_3 | SRR5043829 | 33,425,342 | 83.1 | 73.4 | |
240d_1 | SRR5043821 | 33,403,006 | 81.4 | 70.9 | |
240d_2 | SRR5043822 | 34,412,034 | 83.7 | 74.4 | |
240d_3 | SRR5043823 | 34,893,280 | 82.9 | 73.1 | |
400d_1 | SRR5043818 | 42,825,118 | 82.1 | 71.7 | |
400d_2 | SRR5043819 | 36,291,654 | 81.6 | 71.0 | |
400d_3 | SRR5043820 | 36,313,474 | 82.7 | 72.5 | |
RRBS data | 120d | SRR5171452 | 44,613,858 | 68.8 | 63.9 |
240d | SRR5171451 | 43,556,079 | 69.9 | 64.5 | |
“60d” represents 60 days, similar as “120d,” “240d,” and “400d.”