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. 2017 Oct 6;73(1):57–65. doi: 10.1093/jac/dkx342

Table 1.

Primer sequences

Primer Sequence 5′ to 3′ Target/purpose
traG_for GAATAACCTTGGTTTGGCTTCGG traG
traG_rev CATACACGAGCATGAGCGAAATTG
nadV_for CTGTATGAGATTTAAGGAAAGAAATTATTATGGATAACC nadV
nadV_rev GCGTATTAAGTACAAATATCATAGCGTAGTGC
floR_for CGACGCCCGCTATGATCCAACTC floR RT–PCR
floR_rev CCCAAAAAGCCGGACTCGCGAAG
IceFlo_L1_out GCGAACGTCTTACCATCATTTCTC circular forms and insertion sites of ICEApl2
IceFlo_R1_out GATTGGACTGAAATAGCGGAGG
IceFlo_L2_out GTGGTTTTAAGCGTTGAAAGGC
IceFlo_R2_out GGTAGCGAAGGAATTTGTGGTTTAG
yhaH_5′_out GCGTAAAGCATAGATAAACCACTCC
prfC_5′_out GCGAGATGATAGCAAAGGTCC
FloR_start_fora GAGGGTTGATTCGTCATGACCA cloning of floR genes
FloR_down_rev GGATACCGACATTCACGAGGTTTC
FloR_TAmut_for CCGGTATGGGCACCTACTTCGTCTTCTTCTCG site-directed mutagenesis
FloR_TAmut_rev CGAGAAGAAGACGAAGTAGGTGCCCATACCGG
FloR_CTmut_for CCCTATCGCCGGAGTATTGATCGGCGAGTTC
FloR_CTmut_rev GAACTCGCCGATCAATACTCCGGCGATAGGG
a

In the sequence of primer FloR_start_for, the bold letters indicate the RBS and the italics indicate the start codon for the floR gene.