Table 2. Allelic diversity of the European plum germplasm evaluated in this study.
| SSR locus | LG | Motif | AP | AO | AM | AE | A<1% | A<5% |
|---|---|---|---|---|---|---|---|---|
| UDP96-005 | 1 | (AC)16TG(CT)2CA(CT)11 | 112 (6.25) | 35 | 4.19 | 13.82 | 2.86 | 40.00 |
| CPPCT-029 | 1 | (CT)24 | 36 (29.06) | 17 | 3.34 | 6.11 | 0.00 | 41.18 |
| UDP96-008 | 3 | (CA)23 | 34 (34.09) | 8 | 3.67 | 4.88 | 12.50 | 12.50 |
| BPPCT-039 | 3 | (GA)20 | 101 (9.02) | 36 | 4.83 | 13.19 | 22.22 | 44.44 |
| pchgms-2 | 4 | (CT)24 | 72 (10.76) | 19 | 3.59 | 6.87 | 10.53 | 42.11 |
| CPSCT-005 | 4 | (CT)15 | 90 (9.70) | 25 | 3.89 | 8.38 | 20.00 | 52.00 |
| UDP98-412 | 6 | (AG)28 | 79 (16.66) | 21 | 4.28 | 7.70 | 14.29 | 33.33 |
| BPPCT-025 | 6 | (GA)29 | 100 (8.80) | 39 | 4.34 | 13.73 | 10.26 | 53.85 |
| CPPCT-033 | 7 | (CT)16 | 80 (14.91) | 18 | 4,38 | 9.16 | 0.00 | 11.11 |
| CPSCT-026 | 7 | (CT)16 | 101 (12.59) | 23 | 4.89 | 11.36 | 8.70 | 21.74 |
| UDP98-409 | 8 | (AG)19 | 62 (14.06) | 16 | 2.74 | 6.17 | 12.50 | 37.50 |
| Mean | – | – | 78.82 | 23.36 | 4.01 | 9.21 | 10.35 | 35.43 |
AP, allelic phenotypes pointing out in brackets the frequency of the most common variant
AO, number of observed alleles
AM, mean number of alleles per genotype
AE, effective number of alleles
AR, number of alleles present in <1% and <5% of genotypes (as percentages of the total number of alleles for each SSR).