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. 2018 Mar 29;14(3):e1006078. doi: 10.1371/journal.pcbi.1006078

Fig 1. CLIPseq motif finding pipeline.

Fig 1

Bam files for sample and control are processed through our peak detection module. The structure of each peak is calculated using RNAfold and the resulting sequence/structure peaks are clustered using SARNAclust.