Table 1.
Summary of 23 Middle East respiratory syndrome coronavirus clinical samples sequenced and submitted to GenBank
| Cluster | Case | Type | Sample collection date | Sequence Type | GenBank accession | Distance to index (nucleotide) |
|---|---|---|---|---|---|---|
| Healthcare‐associated clusters (HCA) I (Abu Dhabi) | 2013_002 | Index | 2013 Jul 10 | Genome | KY581684 | – |
| 2013_003 | Secondary | 2013 Jul 12 | S/N | S: KY673146; N: KY673143 | 0a | |
| 2013_004 | Secondary | 2013 Jul 12 | Genome | KY581685 | 1 | |
| Other (Oman) | 2013_007 | Sporadic | 2013 Oct 12 | S/N | S: KP236092N: KP236093 | – |
| HH A (Abu Dhabi) | 2013_008 | Index | 2013 Nov 24 | S/N | N: KY673144 | – |
| 2013_009 | Secondary | 2013 Nov 25 | Genome | KP209312 | 0a | |
| HH B (Dubai/Abu Dhabi) | 2013_011 | Secondary | 2013 Dec 23 | Genome | KY581687 | – |
| HCA II (Western Region) | 2014_002 | Index | 2014 Mar 16 | Genome | KP209310 | – |
| HH C (Al Ain) | 2014_008b | Index | 2014 Apr 09 | Genome | KP209306 | – |
| 2014_009 | Secondary | 2014 Apr 10 | Genome | KY581686 | 2 | |
| 2014_011 | Secondary | 2014 Apr 10 | Genome | KY581688 | 2 | |
| 2014_015 | Secondary | 2014 Apr 10 | Genome | KY581689 | 2 | |
| HCA III (Al Ain) | 2014_008b | Index | 2014 Apr 09 | Genome | KP209306 | – |
| 2014_016 | Secondary | 2014 Apr 12 | Genome | KP209308 | 3 | |
| 2014_017 | Secondary | 2014 Apr 12 | Genome | KY581690 | 2 | |
| 2014_018 | Secondary | 2014 Apr 12 | Genome | KP209307 | 2 | |
| 2014_023 | Secondary | 2014 Apr 14 | Genome | KY581691 | 0 | |
| 2014_025 | Secondary | 2014 Apr 15 | Genome | KY581692 | 1 | |
| 2014_026 | Tertiary | 2014 Apr 15 | Genome | KP209313 | 1 | |
| 2014_030 | Secondary | 2014 Apr 16 | Genome | KP209309 | 0 | |
| 2014_033 | Tertiary | 2014 Apr 20 | Genome | KP209311 | 0 | |
| 2014_045 | Tertiary | 2014 Apr 25 | S/N | S: KY673147; N: KY673145 | 0a | |
| Other (Jeddah, Kingdom of Saudi Arabia) | 2014_032 | Sporadic | 2014 Apr 20 | Genome | KY581693 | – |
| Other | 2014_XXX | Unknown | Unknown | Genome | KY581694 | – |
a
Sequences compared are not full genomes.
b
2014_008 is the index patient for both HH C and HCA III.
This article is being made freely available through PubMed Central as part of the COVID-19 public health emergency response. It can be used for unrestricted research re-use and analysis in any form or by any means with acknowledgement of the original source, for the duration of the public health emergency.