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. Author manuscript; available in PMC: 2019 Apr 15.
Published in final edited form as: J Immunol. 2018 Mar 5;200(8):2727–2737. doi: 10.4049/jimmunol.1701764

FIGURE 2.

FIGURE 2

SNPTEST results for association between Indian VL and imputed AA variants within the HLA-DRB1 binding groove. Imputation was carried out using SNP2HLA and reference data from T1DGC, as referenced in the main text. Dark grey shading indicates protective alleles (odds ratio <1), light grey shading risk alleles (odd ratio >1). Bold lettering highlights AA at positions 11 and 37 that are unique to protective allele groups, as discussed in the text.