Table 2.
Properties of differentially expressed proteins.
| UniProt accession | Protein name and species | Significance (−10lgP*) | Sequence Coverage (%) | Peptide | Unique Peptide | Fold change (ratio of T/C)** | Expression |
|---|---|---|---|---|---|---|---|
| M4ELI2 | Uncharacterized protein (Brassica rapa) | 35.08 | 17 | 2 | 2 | 0.27 | Down |
| M4CH75 | Uncharacterized protein (B. rapa) | 33.24 | 37 | 14 | 2 | 13.39 | Up |
| M4F6E3 | Acid beta-fructofuranosidase 3, vacuolar-like (B. rapa) | 28.38 | 28 | 13 | 8 | 0.34 | Down |
| M4DWM1 | Reticuline oxidase-like protein (B. rapa) | 26.63 | 10 | 6 | 3 | 0.31 | Down |
| A0A0H3XZN3 | ATP synthase subunit alpha, chloroplastic OS (Brassica oleracea) | 21.78 | 13 | 5 | 5 | 0.27 | Down |
| M4D2P3 | Niemann-Pick C1 protein (B. napus) | 20.18 | 4 | 4 | 4 | 0.28 | Down |
| A0A078CNZ6 | Alpha-mannosidase OS (B. napus) | 19.8 | 36 | 29 | 1 | 0.27 | Down |
| C7E9R4 | Peroxidase 12(Fragment) OS (B. rapa) | 19.8 | 22 | 6 | 6 | 0.33 | Down |
| A0A0D3DB06 | Pro-resilin-like (B. oleracea) | 18.85 | 9 | 4 | 1 | 2.66 | Up |
| A0A078FEH1 | Germin-like protein subfamily 2 member 4 (B. napus) | 18.53 | 17 | 3 | 2 | 0.21 | Down |
| M4DQZ2 | LRR receptor-like protein kinase At1g51890 (B. rapa) | 18.47 | 3 | 2 | 2 | 0.17 | Down |
| G4TTT8 | Related to cysteine synthase (P. indica) | 18.15 | 5 | 1 | 1 | 0.29 | Down |
| A0A078JPB7 | Alpha-amylase/subtilisin inhibitor-like (B. napus) | 18.02 | 20 | 3 | 3 | 0.47 | Down |
| M4ECR7 | Basic blue protein (B. napus) | 17.73 | 39 | 3 | 3 | 0.16 | Down |
| A0A078EYR1 | Adenylosuccinatesynthetase (B. napus) | 17.4 | 18 | 6 | 2 | 0.1 | Down |
| A0A078I917 | RNA-binding protein 8A-B-like (B. napus) | 17.17 | 37 | 6 | 3 | 0.5 | Down |
| A0A078J557 | Epidermis-specific secreted glycoprotein EP1-like (B. napus) | 17.13 | 26 | 12 | 1 | 0.34 | Down |
| A0A0D3CXE3 | MLP-like protein 34 (B. oleracea) | 17.03 | 61 | 11 | 3 | 0.45 | Down |
| A0A0D3BFD4 | Alcohol dehydrogenase (Fragment) OS (B. oleracea) | 16.96 | 8 | 4 | 1 | 0.26 | Down |
| A0A078GUN5 | Translationally-controlled tumor protein homolog (B. napus) | 16.87 | 39 | 7 | 1 | 3.16 | Up |
| A0A0D3E4R7 | 3-oxoacyl-[acyl-carrier-protein] synthase III (FabB), chloroplastic-like (B. oleracea) | 16.19 | 15 | 4 | 4 | 0.2 | Down |
| M4CCU0 | LysM domain-containing GPI-anchored protein 2-like (B. rapa) | 16.04 | 12 | 3 | 2 | 0.38 | Down |
| M4ECA0 | Glycerophosphodiester phosphodiesterase GDPDL3 (B. rapa) | 15.83 | 11 | 6 | 2 | 0.46 | Down |
| C7E9R5 | Peroxidase 21 isofrom X2 (Fragment) (B. napus) | 15.76 | 18 | 3 | 3 | 0.31 | Down |
| A0A078GF82 | Peptidylprolyl isomerase (B. napus) | 15.74 | 8 | 1 | 1 | 4.63 | Up |
| M4E2D2 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like (B. rapa) | 15.73 | 13 | 1 | 1 | 7.35 | Up |
| M4EHS7 | Receptor-like kinase TMK4 (B. rapa) | 15.54 | 7 | 4 | 2 | 0.21 | Down |
| A0A078CRI1 | Nudix hydrolase 3-like (B. napus) | 15.42 | 7 | 4 | 4 | 0.2 | Down |
| A0A078ILF0 | N-acetyl-gamma-glutamyl-phosphate reductase (B. napus) | 15.16 | 23 | 7 | 7 | 0.18 | Down |
| M4CPB4 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ-like (B. rapa) | 15.05 | 27 | 6 | 5 | 0.48 | Down |
| A0A078JH45 | Eukaryotic translation initiation factor 3 subunit F OS (B. napus) | 15.03 | 25 | 6 | 2 | 0.15 | Down |
| A0A0D3B5Y5 | Eukaryotic translation initiation factor 3 subunit F (B. oleracea) | 14.98 | 32 | 7 | 3 | 0.41 | Down |
| A0A078HY34 | Suppressor protein STM1-like (B. napus) | 14.92 | 16 | 3 | 3 | 0.37 | Down |
| M4D445 | Glucan endo-1,3-beta-glucosidase (B. rapa) | 14.9 | 2 | 1 | 1 | 0.38 | Down |
| A0A078EIS2 | Uncharacterized protein OS (B. napus) | 14.55 | 3 | 1 | 1 | 2.28 | Up |
| A0A078FZ46 | Subtilisin-like protease SBT2.5 (B. napus) | 14.27 | 2 | 1 | 1 | 6.46 | Up |
| M4E064 | Jacalin-related lectin 35 (B. rapa) | 14.26 | 34 | 8 | 6 | 0.49 | Down |
| A0A078F4G5 | Pectin acetylesterase 5-like (B. napus) | 14.15 | 7 | 2 | 2 | 0.37 | Down |
| M4E663 | Peroxidase 69 (B. rapa) | 14.1 | 25 | 8 | 4 | 5.34 | Up |
| A0A078IBN1 | RNA-binding protein CP29B, chloroplastic-like (B. napus) | 13.92 | 21 | 5 | 1 | 6.26 | Up |
| A0A0D3CS77 | 26 S protease regulatory subunit 7 homolog A-like (B. oleracea) | 13.83 | 1 | 1 | 1 | 5.13 | Up |
| A0A0D3CNP2 | Aminoacylase-1 (B. oleracea) | 13.83 | 15 | 6 | 2 | 0.15 | Down |
| A0A078FBQ2 | Protein modifier of SNC1 11-like (B. napus) | 13.65 | 14 | 2 | 2 | 3.13 | Up |
| M4CEX3 | DNA ligase (B. rapa) | 13.54 | 1 | 1 | 1 | 2.35 | Up |
| A0A078E9C4 | Monocopper oxidase-like protein SKU5 (B. napus) | 13.38 | 21 | 10 | 1 | 0.35 | Down |
| M4DJX7 | Aspartic proteinase A1-like = GN (B. oleracea) | 13.13 | 34 | 14 | 1 | 0.36 | Down |
*Low scoring peptide identifications are filtered out by setting −10lgP threshold >13 (Peak studio 8.0). **Proteins which contains the T/C (Treated/Control) ratio ≥2.28 and ≤0.5 were considered as significant.