Table 3.
List of rhizosphere bacteria isolated from Hada Al Sham and the top hits obtained from BLAST searches against the NCBI nucleotide database.
| Isolate | Phylum; Class; Order; Family | Plant species | Submitted name (GenBank ID) | Description | |||
|---|---|---|---|---|---|---|---|
| Top blast strains | Query cover (%) | Identity (%) | Accession | ||||
| JD-1 | Firmicutes; Bacilli; Bacillales; Bacillaceae | Setaria viridis | Bacillus endophyticus JD-1 (KY941113) | Bacillus endophyticus 2DT | 100 | 99 | NR_025122.1 |
| JD-2 | Firmicutes; Bacilli; Bacillales; Bacillaceae | Setaria viridis | Bacillus endophyticus JD-2 (KY941114) | Bacillus endophyticus 2DT | 99 | 99 | NR_025122.1 |
| JD-3 | Firmicutes; Bacilli; Bacillales; Bacillaceae | Setaria viridis | Bacillus subtilis JD-3 (KY941115) | Bacillus subtilis subsp. inaquosorum BGSC 3A28 | 100 | 99 | NR_104873.1 |
| JD-4 | Firmicutes; Bacilli; Bacillales; Bacillaceae | Setaria viridis | Bacillus endophyticus JD-4 (KY941116) | Bacillus endophyticus 2DT | 100 | 99 | NR_025122.1 |
| JD-5 | Firmicutes; Bacilli; Bacillales; Bacillaceae | Cenchrus ciliaris | Bacillus cereus JD-5 (KY941117) | Bacillus cereus CCM 2010 | 100 | 99 | KY628813.1 |
| JD-6 | Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterbacteriaceae | Cenchrus ciliaris | Enterobacter cloacae JD-6 (KY941118) | Enterobacter cloacae subsp. cloacae ATCC 13047 | 100 | 99 | CP001918.1 |
| JD-7 | Firmicutes; Bacilli; Bacillales; Bacillaceae | Cenchrus ciliaris | Bacillus megaterium JD-7 (KY941119) | Bacillus megaterium NBRC 15308 | 100 | 99 | CP009920.1 |
| JD-8 | Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterbacteriaceae | Panicum antidotale | Enterobacter cloacae JD-8 (KY941120) | Enterobacter cloacae subsp. cloacae ATCC 13047 | 100 | 99 | CP001918.1 |
| JD-9 | Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterbacteriaceae | Panicum antidotale | Enterobacter cloacae JD-9 (KY941121) | Enterobacter cloacae subsp. dissolvens LMG 2683 | 100 | 99 | NR_044978.1 |
| JD-10 | Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae | Panicum antidotale | Acinetobacter pittii JD-10 (KY941122) | Acinetobacter sp. NRRL B-41902 | 100 | 99 | KU921101.1 |
| JD-11 | Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae | Amaranthus viridis | Acinetobacter pittii JD-11 (KY941123) | Acinetobacter pittii ATCC 19004 | 100 | 99 | NR_117621.1 |
| JD-12 | Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae | Amaranthus viridis | Acinetobacter pittii JD-12 (KY941124) | Acinetobacter pittii ATCC 19004 | 100 | 99 | NR_117621.1 |
| JD-13 | Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae | Amaranthus viridis | Acinetobacter pittii JD-13 (KY941125) | Acinetobacter sp. NRRL B-41902 | 100 | 99 | KU921101.1 |
| JD-14 | Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae | Dichanthium annulatum | Acinetobacter pittii JD-14 (KY941126) | Acinetobacter sp. NRRL B-41902 | 99 | 99 | KU921101.1 |
| JD-15 | Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae | Dichanthium annulatum | Acinetobacter pittii JD-15 (KY941127) | Acinetobacter pittii ATCC 19004 | 100 | 99 | NR_117621.1 |
| JD-16 | Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae | Dichanthium annulatum | Acinetobacter pittii JD-16 (KY941128) | Acinetobacter pittii ATCC 19004 | 100 | 99 | NR_117621.1 |
| JD-17 | Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae | Dichanthium annulatum | Acinetobacter pittii JD-17 (KY941129) | Acinetobacter pittii ATCC 19004 | 100 | 99 | NR_117621.1 |