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. 2018 Apr 10;3(3):e00198-17. doi: 10.1128/mSystems.00198-17

TABLE 1 .

M. florum strains and genome sequencing overview

Strain GenBank
accession
no.
Genome
size (bp)
% GC No. of
gaps
No. of
protein-
coding
genes
No. of
functional
RNAs
No. of
accessory
genes
Genome
coding
percentage
Collection Source Reference
or source
L1 AE017263.1 793,224 27.0 0 685 35 136 93.9 Florida Citrus limon 25
W37 CP006778.1 825,824 27.0 0 731 35 179 93.3 Gibson
City, IL
Solidago sp. 32
BARC 787 CP022514 738,512 27.1 0 651 35 102 94.0 Beltsville,
MD
Unspecified
insect
Unpublisheda,d
MQ3 CP022512 793,277 27.0 0 698 35 146 94.2 Maryland Monobia quadriens 34
CnuA-2 CP022513 813,801 27.0 0 710 35 158 93.9 Maryland Coleoptera:
Cantharidae
33
MouA-2 CP022508 781,099 27.0 0 685 35 134 93.5 Beltsville,
MD
Vespid wasp Unpublisheda,e
W23 CP022505 773,885 27.1 0 688 35 137 94.1 North
Platte,
NE
Helianthus annuus 32
BARC 786 CP022510 765,660 27.4 1b 669 35 119 93.5 Beltsville,
MD
Beetle Unpublisheda,d
BARC 781 CP022511 803,948 27.1 1b 691 35 139 92.9 Beltsville,
MD
Beetle Unpublisheda,d
GF CP022509 792,347 27.0 2b,c 699 35 147 94.0 Florida Citrus paradisi 25
W17 CP022507 787,107 27.4 3c 693 35 140 92.6 Pawnee
National
Grassland,
CO
Aster sp. 32
W20 CP022506 830,640 27.0 4b,c 740 35 187 92.5 Ogallala,
NE
Aster simplex 32
W12 CP022432 829,202 27.0 4b,c 734 35 181 93.3 Kremmling,
CO
Chrysothamnus sp. 32
a

Gail E. Gasparich and Robert E. Davis, personal communication.

b

Gaps containing tandem repeats.

c

Gaps linked to gene duplications.

d

Isolated by R. Whitcomb in 1986.

e

Isolated by T. Clark and K. Hackett in 1986.