Table 1:
ALLPATHS-LG | ||
---|---|---|
Sequence statistics | Illumina data | PacBio PBJelly |
Number of scaffolds | 2866 | 2674 (−6.7%) |
Total size of scaffolds | 315,266,043 | 326,533,584 (+3.5%) |
Longest scaffold | 3,162,838 | 3,488,351 (+9.3%) |
N50 scaffold length | 318,490 | 335,712 (+5.1%) |
Gapped Ns in scaffolds | 67,706,454 | 27,311,787 (−59.7%) |
Number of contigs | 33,026 | n/a |
Number of contigs in scaffolds | 32,063 | n/a |
Total size of contigs | 247,565,733 | n/a |
N50 contig length | 16,235 | n/a |