Table 4. Structure solution and refinement.
Resolution range (Å) | 36.72–2.19 (2.25–2.19) |
Completeness (%) | 94.5 (80.9) |
No. of reflections, working set | 27392 (2317) |
No. of reflections, test set | 1895 (165) |
Final R cryst † | 0.189 (0.245) |
Final R free † | 0.221 (0.254) |
No. of non-H atoms | |
Protein | 2938 |
Ions (Na+, Zn2+, PO4 3−) | 8 |
Ligand | 25 |
Water | 182 |
Total | 3153 |
R.m.s. deviations | |
Bonds (Å) | 0.016 |
Angles (°) | 1.8 |
Average B factors (Å2) | |
Protein | 30 |
Ions (Na+, Zn2+, PO4 3−) | 36 |
Ligand | 58 |
Water | 35 |
Ramachandran plot‡ | |
Most favoured (%) | 97.9 |
Allowed (%) | 2.1 |
R cryst = ; R free is the R factor for a selected subset of the reflections that was not included in refinement calculations.
Ramachandran plot calculated using MolProbity (Chen et al., 2010 ▸).