Table 1.
Marker | Clade | Number | nh | s | Pi (%) | h | Pairwise difference (k) | Tajima’s D | Fu’s Fs |
---|---|---|---|---|---|---|---|---|---|
cytb | all | 241 | 86 | 91 | 4.32 | 0.98 | 31.38 | −0.13 | −1.43 |
SE | 49 | 20 | 128 | 2.47 | 0.88 | 25.52 | −0.11 | −0.44 | |
C | 163 | 61 | 54 | 1.79 | 0.98 | 16.30 | −0.09 | −0.57 | |
SW | 29 | 14 | – | 1.54 | 0.91 | 12.16 | −0.11 | − 0.04 | |
BRCA1 | 62 | 19 | 19 | 0.23 | 0.86 | 2.02 | −0.08 | − 0.08 | |
ETS2 | 71 | 24 | 32 | 0.60 | 0.87 | 4.86 | −0.08 | − 0.36 | |
G6pd | 48 | 8 | 7 | 0.32 | 0.81 | 1.51 | −0.09 | 0.27 | |
GHR | 68 | 16 | 21 | 0.59 | 0.87 | 4.37 | −0.10 | −0.16 | |
IRBP | 65 | 32 | 39 | 0.40 | 0.96 | 3.51 | −0.07 | −0.31 |
The main clades, numbers of individuals (n), number of haplotypes (nh), number of polymorphic (segregating) sites (s), nucleotide diversity (Pi), haplotype diversity (h), and mean number of pairwise nucleotide differences (k). Values in bold indicate significance based on the P value