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. 2018 Apr 10;18:50. doi: 10.1186/s12862-018-1168-3

Table 1.

Genetic diversity and neutrality test estimates based on mtDNA and nDNA for all individuals and each clade

Marker Clade Number nh s Pi (%) h Pairwise difference (k) Tajima’s D Fu’s Fs
cytb all 241 86 91 4.32 0.98 31.38 −0.13 −1.43
SE 49 20 128 2.47 0.88 25.52 −0.11 −0.44
C 163 61 54 1.79 0.98 16.30 −0.09 −0.57
SW 29 14 1.54 0.91 12.16 −0.11 − 0.04
BRCA1 62 19 19 0.23 0.86 2.02 −0.08 − 0.08
ETS2 71 24 32 0.60 0.87 4.86 −0.08 − 0.36
G6pd 48 8 7 0.32 0.81 1.51 −0.09 0.27
GHR 68 16 21 0.59 0.87 4.37 −0.10 −0.16
IRBP 65 32 39 0.40 0.96 3.51 −0.07 −0.31

The main clades, numbers of individuals (n), number of haplotypes (nh), number of polymorphic (segregating) sites (s), nucleotide diversity (Pi), haplotype diversity (h), and mean number of pairwise nucleotide differences (k). Values in bold indicate significance based on the P value