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. 2018 Apr 10;19:242. doi: 10.1186/s12864-018-4636-7

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© The Author(s). 2018, corrected publication June 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — Circular representation of Clostridium beijerinckii DSM6423 genome. CGView representation [51] of the circular genome of the DSM6423 strain and its extrachromosomic elements (plasmids: pNF1, pNF2 and double stranded linear phage ɸ6423). Circles display (from the outside): (1) GC percent deviation (GC window - mean GC) in a 1000-bp window. (2) Predicted CDSs transcribed in the clockwise direction. (3) Predicted CDSs transcribed in the counterclockwise direction. Genes displayed in (2) and (3) are color-coded according different categories: red and blue: MaGe validated annotations orange: MicroScope automatic annotation with a reference genome purple: Primary/Automatic annotations. (4) GC skew (G + C/G-C) in a 1000-bp window. (5) rRNA (blue), tRNA (green), misc_RNA (orange), Transposable elements (pink) and pseudogenes (grey)