Table 5.
The number of hits for NACHT and FISNA domains in the unitig assemblies for cod and haddock, as a proxy for number of NLR genes. Substantially more hits are found in the unitigs that in the contigs of the final assemblies, indicating that many of the unitigs are not included, possibly because they are categorized as repetitive sequence
| Domain | Haddock | Cod | |
|---|---|---|---|
| NACHT | all | 613 | 656 |
| > 50% domain length | 224 | 264 | |
| > 75% domain length | 121 | 140 | |
| > 75% domain length, with stop codons | 46 | 51 | |
| FISNA | all | 611 | 552 |
| > 50% domain length | 553 | 505 | |
| > 75% domain length | 384 | 359 | |
| > 75% domain length, with stop codons | 75 | 107 |