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. 2018 Apr 11;13(4):e0195764. doi: 10.1371/journal.pone.0195764

Table 2. Previously unreported AK2 missense variants detected in clinical trial participants located in Bangkok, Thailand, Cape Town, South Africa, and New York City, USA.

Geographic Location Variant (ref.>alt.) cDNA Position Coding DNA Sequence Position Protein Position Amino Acid Substitution (ref.>alt.) SIFT Prediction PolyPhen Prediction
Bangkok T>C 699 616 206 I>V tolerated(0.38) benign(0.063)
Cape Town G>A 106 23 8 A>V tolerated(0.27) benign(0.002)
Cape Town T>C 166 83 28 K>R deleterious(0) possibly_damaging(0.693)
Cape Town G>A 247 164 55 A>V deleterious(0) possibly_damaging(0.774)
Cape Town C>T 258 175 59 E>K tolerated(0.29) benign(0.01)
Cape Town C>T 312 229 77 E>K deleterious(0.01) possibly_damaging(0.656)
New York City A>C 139 56 19 V>G deleterious(0) possibly_damaging(0.882)
New York City C>T 237 154 52 A>T deleterious(0.01) possibly_damaging(0.859)
New York City T>C 267 184 62 K>E tolerated(0.59) benign(0.134)
New York City C>T 546 463 155 E>K tolerated(0.59) benign(0.187)
New York City G>A 664 581 194 T>I deleterious(0) probably_damaging(0.997)
New York City T>C 699 616 206 I>V tolerated(0.38) benign(0.063)
New York City T>A 699 616 206 I>F deleterious(0.03) benign(0.288)

Twelve previously unreported genetic missense variants were detected in 11 individuals out of 505 individuals sequenced for the coding DNA reference sequence NM_001625.3. All individuals that had detectable variants were heterozygous for those variants. One individual from Cape Town had two detectable missense variants and one individual from New York City had two detectable missense variants. Across the three geographic locations where individuals were sequenced for AK2, one AK2 variant was found in both Bangkok and New York City but not in Cape Town.