Table 3.

Summary of peptides derived from capsid protein VP0 that were crosslinked to sub-genomic HPeV1 RNA.

Sub-genomic sequence length (n.t.)	Amino acid sequencea
1576	METIKSIADM ATGVVSSVDS TINAVNEKVE SVGNEIGGNL LTKVADDASN ILGPNCFATT AEPENkNVVQ ATTTVNTTNL TQHPSAPTMP FSPDFSNVDN FHSMAYDITT GDKNPSKLVR LETHEWTPSW ARGYQITHVE LPkVFWDHQD kPAYGQSRYF AAVRCGFHFQ VQVNVNQGTA GSALVVYEPk PVVTYDSkLE FGAFTNLPHV LMNLAETTQA DLCIPYVADT NYVKTDSSDL GQLkVYVWTP LSIPTGSANQ VDVTILGSLL QLDFQNPRVF AQDVNIYDN
2335	METIKSIADM ATGVVSSVDS TINAVNEkVE SVGNEIGGNL LTKVADDASN ILGPNCFATT AEPENKNVVQ ATTTVNTTNL TQHPSAPTMP FSPDFSNVDN FHSMAYDITT GDkNPSKLVR LETHEWTPSW ARGYQITHVE LPkVFWDHQD kPAYGQSRYF AAVRCGFHFQ VQVNVNQGTA GSALVVYEPk PVVTYDSkLE FGAFTNLPHV LMNLAETTQA DLCIPYVADT NYVKTDSSDL GQLKVYVWTP LSIPTGSANQ VDVTILGSLL QLDFQNPRVF AQDVNIYDN
3037	METIKSIADM ATGVVSSVDS TINAVNEKVE SVGNEIGGNL LTKVADDASN ILGPNCFATT AEPENkNVVQ ATTTVNTTNL TQHPSAPTMP FSPDFSNVDN FHSMAYDITT GDKNPSKLVR LETHEWTPSW ARGYQITHVE LPKVFWDHQD kPAYGQSRYF AAVRCGFHFQ VQVNVNQGTA GSALVVYEPK PVVTYDSKLE FGAFTNLPHV LMNLAETTQA DLCIPYVADT NYVKTDSSDL GQLkVYVWTP LSIPTGSANQ VDVTILGSLL QLDFQNPRVF AQDVNIYDN

^aThe RCAP peptides identified are in bold. The missed cleavages are shown lowercase and highlighted in bold-underline. The disordered regions not identified in the atomic model are underlined.