Table 2.
Setup for Experiment I: The simple categorisation introduced (see ‘Setup of Experiment I and Experiment II for a gene/protein synonym detection task’) has been applied to the terms from PubMed abstract/title from the small-annotated corpus (first column) as well as to the target terms (second column). Each row of the third column contains the number of target terms for the experiment taking into account the categories that appear in the first and second column
| Simple categorisation introduced | ||
|---|---|---|
| Terms from PubMed titles/abstracts | Target terms | n |
| Gene symbol appears | Gene symbol appears | 5 |
| Gene symbol appears | Only gene symbol | 13 |
| Gene symbol appears | Only protein name | 3 |
| Gene symbol appears | Refer protein name | 2 |
| Gene symbol appears | Terms from protein name | 2 |
| Only gene symbol | Only gene symbol | 21 |
| Refer protein name | Gene symbol appears | 1 |
| Refer protein name | Only protein name | 16 |
| Refer protein name | Refer protein name | 18 |
| Refer protein name | Terms from protein name | 4 |