Table 4.
Exemplifying results for Experiment I: Top twelve ranked candidate terms (highest cosine similarity) from the word embeddings created with CBOW and Skip-gram for the target term “KLF7” that appears in the abstract of the PubMed article with ID = 23,468,932
| CBOW | Skip-gram | |||
|---|---|---|---|---|
| Rank | Candidate terms from word embeddings | Cosine | Candidate terms from word embeddings | Cosine |
| 1 | MoKA | 0.376371 | Prrx2 | 0.601920 |
| 2 | pluripotency-associated_genes | 0.335113 | Klf7 | 0.592946 |
| 3 | Sp1_regulates | 0.334092 | Klf7(−/−) | 0.590523 |
| 4 | LOC101928923 | 0.333423 | RXRG | 0.589875 |
| 5 | p107_dephosphorylation | 0.331689 | LOC101928923 | 0.585979 |
| 6 | PU_1 | 0.329925 | SOX-17 | 0.585295 |
| 7 | histone_demethylase | 0.323529 | rs820336 | 0.585094 |
| 8 | gene_promoter | 0.321640 | GLI-binding_site | 0.581073 |
| 9 | homeobox_protein | 0.319997 | Tead2 | 0.580012 |
| 10 | histone_arginine | 0.315875 | hHEX | 0.579868 |
| 11 | transfated | 0.314202 | ACY-957 | 0.579542 |
| 12 | are_unable_to_repress | 0.313112 | ETS1 | 0.577272 |