. 2018 Apr 6;9:655. doi: 10.3389/fimmu.2018.00655

Table 1.

MHC-class II restricted epitopes (A/J).

Peptide	Peptide sequence
^*HA₁₂₀	120 EQLSSVSSFERFEIFPK 136
^*HA₁₇₄	174 YPNLSKSYVNNKEKEVL 190
^*HA₂₁₅	215 VSVVSSHYSRRFTPEIA 231
^*HA₃₅₈	358 TGMVDGWYGYHHQNEQG 374
^*HA₃₇₅	375 SGYAADQKSTQNAINGI 391
^*HA₃₉₈	398 VIEKMNTQFTAVGKEFN 414
^HA₄₉₂*	492 MESVKNGTYDYPKYSEE 508
^*NA₂₇₉	279 CSCYPDTGTVMCVCRDN 295
^*NA₂₉₁	291 VCRDNWHGSNRPWVSFN 307
^*NA₃₅₁	351 YKYGNGVWIGRTKSNRL 367
^*NA₃₈₁	381 TDTDSDFSVKQDVVAIT 397
^*NA₄₀₅	405 SFVQHPELTGLDCIRP 420
^*NA₄₁₆	416 DCIRPCFWVELVRGLPR 432
NA₄₂₂	422 FWVELVRGLPRENTTIW 438
^*NA₄₄₆	446 FCGVNSDTANWSWPDGA 462
^*NA₄₅₂	452 DTANWSWPDGAELPFTI 468
NP₄₉	49 LNDYEGRLIQNSLTIER 65
^*NP₁₀₃	103 KWVRELVLYDKEEIRRI 119
^*NP₁₂₇	127 DDATAGLTHIMIWHSNL 143
^*NP₁₈₇	187 GTMVLELIRMIKRGIND 203
^*NP₂₅₈	258 FLARSALILRGSVAHKS 274
^*NP₃₄₂	342 RVSSFIRGTRVLPRGKL 358
^*NP₄₀₈	408 TQPTFSVQRNLPFDKTT 424
NP₄₁₄	414 VQRNLPFDKTTIMAAFT 430
^*NP₄₂₆	426 MAAFTGNTEGRTSDMRA 442
^*NP₄₃₂	432 NTEGRTSDMRAEIIKMM 448
^*NP₄₇₄	474 PIVPSFDMSNEGSYFFG 490
^*M1₃₇	37 TDLEALMEWLKTRPILS 53
^*M1₁₀₃	103 LKREITFHGAKEIALSY 119
^*M1₁₅₁	151 CEQIADSQHKSHRQMVT 167
^*M1₁₈₇	187 KAMEQMAGSSEQAAEAM 203
^*M1₂₂₈	228 GLKNDLLENLQAYQKRM 244
NS1₁₃	13 CFLWHVRKQVADQDLGD 29
NS1₉₀	90 LTDMTIEEMSRDWFMLM 106
NS1₁₄₄	144 LTLLRAFTEEGAIVGEI 160
NS1₁₇₄	174 VKNAIGVLIGGLEWNDN 190
NS1₁₉₂	192 VRVSETLQRFAWRSSNE 208
NS1₁₉₂	192 VRVSETLQRFAWRSSNE 208

Antigenic peptides from major viral proteins (HA, NA, NP, M1, and NS1) used to identify and quantify epitope specific CD4 T cells in different tissues.

*Peptides used in pools (Figures 6 and 7) to stimulate antigen-specific CD4 T cells followed by intracellular cytokine staining.

The bold numbers represent the amino acid numbers of the N- and C-terminal amino acids of each peptide.