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. 2000 May;123(1):243–254. doi: 10.1104/pp.123.1.243

Table I.

Most prevalent mRNAs as measured by EST redundancya

cDNA Library ESTb Best Match P Valuec Redundancyd Representatione G + C Source
%
Infected soybean 3-10E-HA Pathogenesis-related protein 1 10−119 10 HA 42 G. maxf
3-4G-HA Formate dehydrogenase 10−127 7 HA 67 P. sojaef
4-5G-HA Alcohol dehydrogenase 10−67 7 HA 64 P. sojaef
4-6H-HA Stress-induced PR protein 10−87 6 HA 45 G. maxg
4-7B-HA ATP synthase, β-chain 10−157 4 HA, MY 64 P. sojaeg
8-6C-HA Chalcone synthase 10−210 4 HA 47 G. maxg
5-2H-HA 2-Phosphoglycerate dehydratase 10−164 4 HA, MY 56 P. sojaeg
2-11G-HA Glu dehydrogenase 10−53 4 HA 64 P. sojaeg
Mycelium 8-12D-MY RIC1 protein 10−32 8 MY
9-9D-MY Unknown/hypothetical protein 10−7 8 MY
11-9A-MY Annexin 10−27 7 HA, MY
7-4D-MY Guanine nucleotide binding protein 10−155 6 HA, MY
6-10C-MY Unknown/hypothetical protein 10−7 5 MY
4-9A-MY Thioredoxin peroxidase 10−76 4 MY
3-7A-MY Superoxide dismutase 10−55 4 HA, MY
Zoospore 3-10A-ZO Elicitin 10−5 8 ZO
11-6F-ZO Unknown/hypothetical protein 10−9 8 ZO
4-2B-ZO Unknown/hypothetical protein 10−21 8 ZO
6-5E-ZO ABC transporter 10−31 7 ZO
9-2D-ZO GTP cyclohydrolase 10−67 6 ZO
10-7B-ZO Ribonucleotide reductase 10−128 6 ZO
5-7D-ZO Actin A 10−219 5 HA, MY, ZO
4-2F-ZO Membrane glycoprotein 10−10 5 ZO
7-3H-ZO HAM34 protein 10−18 5 ZO
10-6E-ZO Mucin 10−14 4 ZO
3-5A-ZO Unknown/hypothetical protein 10−9 4 ZO
4-1H-ZO Transcription factor protein 10−4 4 ZO
a

Not including ribosomal proteins. Total no. of ESTs in each library: 1,002 infected plant (HA); 1,002 mycelium (MY); and 1,031 zoospore (ZO). 

b

Representative EST clone from assembly contig. 

c

P value from BLASTX search using entire contiguous sequence resulting from assembly of ESTs. 

d

No. of ESTs from an individual source library that assembled into a contiguous sequence. 

e

Representation of transcript in all three source libraries. 

f

Determined by hybridization analysis. 

g

Predicted from representation, BLASTX match, and percentage G + C content.