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. 2018 May;24(5):688–703. doi: 10.1261/rna.063313.117

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© 2018 Hsu et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society

This article is distributed exclusively by the RNA Society for the first 12 months after the full-issue publication date (see http://rnajournal.cshlp.org/site/misc/terms.xhtml). After 12 months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

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FIGURE 8. — Normalized distributions of AEG-1 clusters in transmembrane protein mRNAs. Plots depicting cluster distributions flanking the start codon (A,B) and stop codon (C,D) of mRNAs encoding cytosolic, transmembrane, or secretory proteins, in the HITS-CLIP (A,C) and PAR-CLIP (C,D) experiments. (E,F) Plots depicting cluster distributions flanking encoded transmembrane domains (E), the transmembrane domains of Type I membrane proteins (F), or relative to subsequent transmembrane domains (G), for the HITS-CLIP and PAR-CLIP data sets. Cluster enrichment data are plotted as cluster density where 0 indicates the first nucleotide of start codons, stop codons, or transmembrane domain-encoding regions.