Table 2.
Identification of genome loci in A. acidocaldarius strain DSM 446 genome that encodes putative glycoside hydrolases
| Gene locus | Product name | Enzyme Commission number | Family | Signal sequence | Transmembrane helices |
|---|---|---|---|---|---|
| Aaci_0048 | α-l-arabinofuranosidase-like protein | Yes (24/25) | Yes | ||
| Aaci_0060 | Xylan α-1,2-glucuronosidase | EC:3.2.1.131 | 67 | No | No |
| Aaci_0332 | β-Glucosidase | EC:3.2.1.21 | 3 | No | No |
| Aaci_0786 | α-Galactosidase | EC:3.2.1.22 | 36 | No | No |
| Aaci_0789 | β-1,4-mannanase | EC:3.2.1.78 | 113 | No | No |
| Aaci_0797 | α-Galactosidase | EC:3.2.1.22 | 4 | No | No |
| Aaci_0912 | Amylo-α-1,6-glucosidase | EC:3.2.1.33 | 13 | No | No |
| Aaci_1218 | β-Galactosidase | EC:3.2.1.23 | 2 | No | No |
| Aaci_1895 | β-Galactosidase/β-glucosidase | EC:3.2.1.21 | 1 | No | No |
| Aaci_2328 | Endo-1,4-β-xylanase | EC:3.2.1.8 | 10 | No | No |
| Aaci_2457 | Polygalacturonase | EC:3.2.1.15 | 28 | Yes (33/34) | Yes |
| Aaci_2475 | Endoglucanase C | EC:3.2.1.4 | 9 | No | No |
| Aaci_2630 | β-Glucosidase/β-xylosidase | EC:3.2.1.21 EC:3.2.1.37 |
3 | No | No |
| Aaci_2868 | α-Glucosidase | EC:3.2.1.20 | 31 | No | No |
| Aaci_2869 | Neopullulanase/cyclomaltodextrinase/maltogenic α-amylase | EC:3.2.1.135 EC:3.2.1.54 EC:3.2.1.133 |
13 | No | No |
| Aaci_2874 | α-Amylase | EC:3.2.1.1 | 13 | Yes (23/24) | No |
| Aaci_2887 | α-Xylosidase | EC:3.2.1.177 | 31 | No | No |
| Aaci_2891 | β-Galactosidase | EC:3.2.1.23 | 42 | No | No |
| Aaci_2894 | α-l-arabinofuranosidase | EC:3.2.1.55 | 51 | No | No |
Classification of Enzyme Commission and glycoside hydrolase family numbers were obtained from the Carbohydrate-Active enZYme database (CAZY). Signal sequences and transmembrane helices were taken from JGI-IMG, and signal sequences were verified using the SignalP program