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Results of MinION sequencing after barcode demultiplexing for an isolate of Zika and for a clinical sample of chikungunya virus.
| Sample | Scheme | Pore | Ct | # reads (2D pass) | Aligned reads | % aligned | % coverage (>25×) | Depth |
|---|---|---|---|---|---|---|---|---|
| Zika WHO Control Reference (11474/16) | ZikaAsian | R9.4 | 18-20 | 9,606 | 9,528 | 99.2 | 97.7 | 392 |
| Chikungunya PEI N11602 | ChikAsia nECSA | R9.4 | 20 | 89,365 | 88,527 | 99.1 | 88 | 2,779 |
