Table 1.
Golgi organization |
||||||
---|---|---|---|---|---|---|
Overexpresssion | KD/KO/Natural Mutation(s) | |||||
Rab Localization |
Wild Type Rab |
GTP-bound Rab |
GDP-bound Rab |
KD |
KO |
Mutation |
Pre-Golgi and cis-Golgi | ||||||
Rab1 | Golgi stable | Golgi unstable Golgi ribbon frag-mentation | Golgi unstable, Golgi ribbon frag-mentation | KD similar to overexpression results | NR | |
Rab2 | Overexpression of the Rab2 GAP results in the accumu-lation of Golgi proteins in the ER. | Golgi ribbon fragments in response to Rab2a and Rab2b knockdown. | ||||
Rab18 | Golgi protein accumulation near ER exit sites with WT or GTP-bound Rab18 | Golgi stable | ||||
Rab41/Rab6dGolgi | Golgi stable | Golgi stable | Golgi ribbon fragmentation | KD, one report of Golgi fragmentation and another of no effect | ||
Rab43 | Golgi frag-nentation | Golgi proteins redistribute to ER exit site adjacent | ||||
Late Golgi/TGN and post Golgi | In most cases, depletion or alteration in function of these Rabs has little to no effect on Golgi organization. Summary outcomes are given for only those Rabs having a distinct effect. | |||||
Rab3 | KD of any of the 4 family members produces Golgi fragmentation | |||||
Rab7b | ||||||
Rab8 | Rab8a KD, one report Golgi fragmentation | |||||
Rab9a/b | ||||||
Rab10 | ||||||
Rab11a | ||||||
Rab13 | ||||||
Rab14 | ||||||
Rab21 | ||||||
Rab22b/Rab31 | Golgi stable | Golgi stable | TGN46 distribu-tion disrupted | KD similar to overexpression results | ||
Rab29 | Golgi unstable, TGN fragmentation | KD similar to overexpression results | ||||
Rab39a | ||||||
“Bona fide” Golgi cisternal association | ||||||
For most of these Rab proteins, there has been little to no investigation of their role in Golgi organization and the reader is referred to high content screen data studies such as that by Galea and Simpson (2015). We summarize here the results of multiple studies for Rab6 and Rab33b. | ||||||
Rab6 | Golgi unstable Proteins relo-cate to ER | Golgi unstable Proteins relo- cate to ER | Golgi stable, if anything, more compact | Golgi stable, by EM longer stacks | KO embry-onically lethal in mice, longer Golgi stacks in MEFs | NR |
Rab19 | ||||||
Rab30 | ||||||
Rab33b | Golgi stable | Golgi unstable Golgi frag- mentation and Golgi proteins relo-cate to ER | Golgi stable | Golgi stable | NR | Rab protein mutations destabilizing mutations fragment Golgi and cause skeletal deformations in humans |
Rab34 | ||||||
Rab36 | ||||||
Rab39b |
Abbreviations
KD, knockdown; KO, knockout; MEF, mouse embryonic fibroblasts; NR, no report
References
Pre-Golgi and cis Golgi Rabs
Rab1;1,5,25,61,66,88,96 Rab2;32,25,1 Rab18;14 Rab41/Rab6d;42 Rab43.14,23,12
Late Golgi/TGN and post Golgi Rabs
“Bona fide” Golgi cisternal associated Rabs
Rab6:6,49,84; Rab33b.91,36,81,3,18,70