. 2018 Apr 16;8:6012. doi: 10.1038/s41598-018-24508-7

Table 1.

Relative abundances of phyla and genera at various growth stages.

Taxon	Relative abundance (%)					r ¹
Taxon	10 d	21 d	63 d	93 d	147 d	r ¹
Phylum
Bacteroidetes	56.14 ± 10.16^a	51.49 ± 10.52^ab	50.63 ± 5.97^ac	43.88 ± 11.09^c	47.95 ± 11.26^bc	−0.28**
Euryarchaeota	0.31 ± 0.35^a	0.86 ± 0.76^a	0.10 ± 0.13^a	1.40 ± 1.07^ab	3.10 ± 5.35^b	0.34**
Firmicutes	35.48 ± 9.11^a	38.75 ± 10.39^ab	43.83 ± 5.60^bc	45.04 ± 9.30^c	44.72 ± 9.64^bc	0.34**
Proteobacteria	5.14 ± 2.79^a	4.49 ± 2.26^a	2.77 ± 1.49^b	2.61 ± 1.18^b	0.93 ± 1.08^c	−0.62**
Spirochaetes	0.92 ± 0.57^ab	1.98 ± 1.37^ab	0.55 ± 0.36^a	5.65 ± 5.54^c	2.57 ± 2.15^b	0.26*
Genus
Bacteroides	18.49 ± 8.27^a	17.13 ± 10.70^a	4.68 ± 3.49^b	0.17 ± 0.42^c	0.10 ± 0.20^c	−0.72**
Bifidobacterium	0.29 ± 0.48^a	0.35 ± 0.32^a	0.23 ± 0.36^a	0.00 ± 0.00^b	0.00 ± 0.00^b	−0.40**
Butyricimonas	4.92 ± 2.23^a	2.16 ± 1.57^b	0.59 ± 0.48^c	0.00 ± 0.00^c	0.00 ± 0.00^c	−0.68**
CF231	0.52 ± 0.33^a	0.36 ± 0.22^a	1.04 ± 0.56^b	2.30 ± 1.08^c	1.51 ± 0.72^d	0.55**
Clostridium	0.93 ± 0.68^a	0.85 ± 0.58^a	2.61 ± 0.69^b	11.50 ± 4.03^c	8.38 ± 2.21^d	0.73**
Desulfovibrio	0.86 ± 0.44^a	1.05 ± 0.50^a	0.23 ± 0.24^b	0.03 ± 0.05^bc	0.00 ± 0.00^c	−0.72**
Dialister	0.35 ± 0.24^a	0.29 ± 0.29^a	1.42 ± 0.43^b	0.95 ± 0.46^c	1.23 ± 0.72^bc	0.53**
Dorea	0.30 ± 0.28^a	0.26 ± 0.20^a	0.09 ± 0.12^b	0.03 ± 0.06^b	0.05 ± 0.07^b	−0.50**
Lactobacillus	12.66 ± 7.54^a	12.44 ± 9.84^a	12.25 ± 5.02^a	2.66 ± 1.16^b	2.77 ± 1.06^b	−0.55**
Megasphaera	0.92 ± 0.44^a	1.37 ± 0.93^a	3.46 ± 1.60^b	3.67 ± 1.97^b	5.77 ± 2.94^c	0.69**
Parabacteroides	2.34 ± 1.08^a	2.66 ± 1.36^a	0.63 ± 0.66^b	0.82 ± 0.37^b	0.49 ± 0.49^b	−0.62**
Prevotella	13.34 ± 5.51^a	10.96 ± 4.88^a	32.48 ± 6.85^b	25.83 ± 9.87^c	34.25 ± 12.40^b	0.65**
Roseburia	0.30 ± 0.21^a	0.28 ± 0.29^a	0.96 ± 0.33^b	0.80 ± 0.26^b	0.98 ± 0.30^b	0.63**
Ruminococcus	1.08 ± 0.49^a	1.33 ± 0.66^a	0.66 ± 0.40^b	0.60 ± 0.34^b	0.61 ± 0.30^b	−0.45**
Shuttleworthia	0.05 ± 0.11^a	0.01 ± 0.04^a	0.32 ± 0.30^a	1.08 ± 0.39^b	1.61 ± 0.96^c	0.78**
SMB53	0.33 ± 0.26^a	0.29 ± 0.21^a	1.15 ± 0.41^b	1.93 ± 0.59^c	1.38 ± 0.48^b	0.67**
Streptococcus	0.82 ± 0.63^a	0.61 ± 0.56^a	2.28 ± 0.89^b	3.22 ± 1.00^c	3.82 ± 1.55^c	0.77**
f__S24-7;g__	5.64 ± 2.81	6.62 ± 4.37	4.54 ± 2.34	6.25 ± 1.47	6.68 ± 4.59	0.07

Data shown as the mean ± SD.

One-way ANOVA with Tukey’s post-hoc test was used. Within a row, different superscript letters indicate significant difference (P < 0.05).

¹Pearson’s correlation coefficient was obtained from simple linear regression, and asterisk indicates significant correlation (*P < 0.01, **P < 0.001).