Skip to main content
. 2017 Nov 10;16(5):1046–1056. doi: 10.1111/pbi.12850

Table 1.

Summary statistic of RS‐NIL3, RH‐CS and RSH‐consensus map based on genotyping informative lines with 102 markers

Panel RS‐NIL3 RH‐CS RSH
Mean (range) Mean (range) Mean (range)
No. informative lines 80 40 120
Avg. retention frequency 0.82 0.56 0.74
Avg. retention frequency/line 0.82 (0–0.98) 0.56 (0.05–0.98) 0.74 (0.0–0.98)
Avg. retention frequency/marker 0.82 (0.71–0.96) 0.56 (0.33–0.97) 0.74 (0.63–0.97)
No. markers 102 102 102
No. double markers 35 63 26
No. mapped loci 67 39 76
Map size (cR) 541.4 272 384.4
Markers per locus 1.52 (1–4) 2.62 (1–9) 1.34 (1–4)
Distances between loci (cR) 8.2 (2.7–50.8) 7.2 (3.9–24.6) 5.13 (1.4–29.5)
No. terminal deletion 14 23 37
No. interstitial deletion 73 19 92
No. breakpoints 160 61 221
Breakpoints/line 2 (1–6) 1.52 (1–4) 1.84 (1–6)
Breakpoints/loci 2.39 (1–12) 1.56 (1–5) 2.91 (1–16)
Mean deletion length a(cR) 63.5 (1.6–384.4) 164.4 (7.8–366.2) 95.7 (1.6–384.4)
a

mean lengths of deletions are calculated as the average of maximum length (distance between the position of retained markers flanking the deletions) and minimum length (distance between the position of deleted markers flanking the deletions) based on cR distances of the RSH‐consensus map.