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. 2017 Oct 18;16(5):1002–1012. doi: 10.1111/pbi.12844

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© 2017 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd.

This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

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Identification and profiling of novel transcripts in cotton. (a) The transcript number of novel genes was detected. (b) The expression level of novel transcripts was lower than the annotated transcripts at 0 DPA and 5 DPA. (c) A new transcript (TCONS_00681513) mapped to the cotton genome and its lower expression level at 5 DPA for Xu142 fl. (d) The length of the transcripts was shorter than the annotated transcripts. (e) 26.7% of annotated transcripts were covered with the TE‐related region, and 49.8% of novel transcripts were covered with the TE‐related region.