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Phylogenetic trees of (A) lipl32 and (B) 16S rRNA Leptospira amplicons from soil and water samples collected at the community site. The trees were constructed using Maximum Likelihood method with HKY85 substitution model. A bootstrap of 1000 replicates was performed and values above 600 are shown in the nodes. Leptonema illini was used as the outgroup for the 16S rRNA tree, and samples colored in green were positive for both 16S rRNA and lipl32 qPCRs.
